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L2_013_122G1_scaffold_252

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_252_1
unknown

Not on your lists

2..631
DNA (630bp) protein (210aa)

This feature has no annotations

L2_013_122G1_scaffold_252_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(579..2075)
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30803.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Cna protein B-type domain./Gram positive anchor.
L2_013_122G1_scaffold_252_3
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2190..6722)
DNA (4533bp) protein (1511aa)
Fibro-slime domain n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GNS8_9FIRM
Fibro-slime domain {ECO:0000313|EMBL:CCY14407.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
fibro-slime domain
L2_013_122G1_scaffold_252_4
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7285..7569)
DNA (285bp) protein (95aa)
Essential protein Yae1, N-terminal domain protein (Fragment) n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R946_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFU77669.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
transposase
L2_013_122G1_scaffold_252_5
unknown

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7812..7994
DNA (183bp) protein (61aa)

This feature has no annotations

L2_013_122G1_scaffold_252_6
unknown

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8037..8771
DNA (735bp) protein (245aa)

This feature has no annotations

L2_013_122G1_scaffold_252_7
unknown

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8773..9168
DNA (396bp) protein (132aa)

This feature has no annotations

L2_013_122G1_scaffold_252_8
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9680..11152)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37327.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_122G1_scaffold_252_9
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11234..13060)
DNA (1827bp) protein (609aa)
Adenylyl-sulfate kinase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G697_9FIRM
Adenylyl-sulfate kinase {ECO:0000313|EMBL:CCY12835.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
CysN; GTPase
L2_013_122G1_scaffold_252_10
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13062..13964)
DNA (903bp) protein (301aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase small subunit n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GA95_9FIRM
L2_013_122G1_scaffold_252_11
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14079..15491)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6EC84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA87757.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
hypothetical protein
L2_013_122G1_scaffold_252_12
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15953..16516
DNA (564bp) protein (188aa)
TIGR00730 family protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETT2_9FIRM
TIGR00730 family protein {ECO:0000313|EMBL:EEG37322.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
conserved hypothetical protein, DprA/Smf-related, family 2
L2_013_122G1_scaffold_252_13
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16623..16979)
DNA (357bp) protein (119aa)
Cobalt transport protein CbiN n=2 Tax=Eubacterium RepID=C0ETT1_9FIRM
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
cobalt transport protein CbiN
L2_013_122G1_scaffold_252_14
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17023..17757)
DNA (735bp) protein (245aa)
Cobalt transport protein CbiM n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GA90_9FIRM
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
cbiM; Cobalt transport protein CbiM
L2_013_122G1_scaffold_252_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17813..18685)
DNA (873bp) protein (291aa)
Cobalt ABC transporter ATP-binding protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G6N3_9FIRM
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY12828.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
cobalt ABC transporter, ATPase subunit
L2_013_122G1_scaffold_252_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18834..19733)
DNA (900bp) protein (300aa)
Cobalt ABC transporter permease protein CbiQ n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJ20_9FIRM
Cobalt ABC transporter permease protein CbiQ {ECO:0000313|EMBL:CCY12827.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
cobalt ABC transporter
L2_013_122G1_scaffold_252_17
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20225..20656
DNA (432bp) protein (144aa)
Transcriptional regulator BlaI/MecI/CopY family n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GAN9_9FIRM
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EEG35882.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Penicillinase repressor.
L2_013_122G1_scaffold_252_18
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20789..21943)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EYP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19355.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_013_122G1_scaffold_252_19
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22025..22795)
DNA (771bp) protein (257aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LRP8_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL23456.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_013_122G1_scaffold_252_20
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22797..23963)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EYP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19355.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_013_122G1_scaffold_252_21
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24030..25391)
DNA (1362bp) protein (454aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GCM4_9FIRM
histidine kinase
L2_013_122G1_scaffold_252_22
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25388..26062)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G1K1_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDB19353.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_013_122G1_scaffold_252_23
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26779..27396)
DNA (618bp) protein (206aa)
Multimeric flavodoxin WrbA n=3 Tax=Clostridiales RepID=D4MP69_9FIRM
multimeric flavodoxin
Multimeric flavodoxin {ECO:0000313|EMBL:CDM67714.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_013_122G1_scaffold_252_24
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27431..28081)
DNA (651bp) protein (217aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GCL8_9FIRM
L2_013_122G1_scaffold_252_25
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28336..30294
DNA (1959bp) protein (653aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G677_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CCY12810.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_252_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30479..31765)
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EEG37778.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EEG37778.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESH6_9FIRM
L2_013_122G1_scaffold_252_27
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31910..32824)
DNA (915bp) protein (305aa)
diacylglycerol kinase (EC:2.7.1.107)
Lipid kinase YegS/Rv2252/BmrU family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GQ99_9FIRM
Lipid kinase YegS/Rv2252/BmrU family {ECO:0000313|EMBL:CCY14761.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_252_28
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33009..34415)
DNA (1407bp) protein (469aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JQU9_9FIRM
L2_013_122G1_scaffold_252_29
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

34823..35404
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6PZC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29813.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
membrane protein
L2_013_122G1_scaffold_252_30
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36046..37596)
DNA (1551bp) protein (517aa)
Sodium/proline symporter n=1 Tax=Clostridium sp. CAG:678 RepID=R5L1P8_9CLOT
Sodium/proline symporter {ECO:0000313|EMBL:CCY67256.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
sodium/proline symporter
Displaying items 1-30 of 57 in total

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