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L2_013_122G1_scaffold_562

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_562_1
unknown

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1..90
DNA (90bp) protein (30aa)

This feature has no annotations

L2_013_122G1_scaffold_562_2
unknown

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217..315
DNA (99bp) protein (33aa)

This feature has no annotations

L2_013_122G1_scaffold_562_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(405..1985)
DNA (1581bp) protein (527aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9N5_9FIRM
ATPase family associated with various cellular activities (AAA).
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CBL01548.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_013_122G1_scaffold_562_4
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2040..3374)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37331.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_013_122G1_scaffold_562_5
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3458..4474)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G4N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19280.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_013_122G1_scaffold_562_6
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4639..5325
DNA (687bp) protein (229aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZQ50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87921.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L2_013_122G1_scaffold_562_7
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5522..6301
DNA (780bp) protein (260aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETU4_9FIRM
L2_013_122G1_scaffold_562_8
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6375..7397
DNA (1023bp) protein (341aa)
LD-carboxypeptidase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAA2_9FIRM
LD-carboxypeptidase {ECO:0000313|EMBL:CCY12839.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF
L2_013_122G1_scaffold_562_9
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7531..8286
DNA (756bp) protein (252aa)
exoA; exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GDD3_9FIRM
Exodeoxyribonuclease III {ECO:0000313|EMBL:CDB19276.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L2_013_122G1_scaffold_562_10
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8371..9435)
DNA (1065bp) protein (355aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GCE9_9FIRM
L2_013_122G1_scaffold_562_11
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9460..9708)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0ESF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19273.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_013_122G1_scaffold_562_12
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10033..10737
DNA (705bp) protein (235aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
MTA/SAH nucleosidase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAA6_9FIRM
L2_013_122G1_scaffold_562_13
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11009..11677
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0ESG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19271.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_013_122G1_scaffold_562_14
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11692..12681)
DNA (990bp) protein (330aa)
pdaA; polysaccharide deacetylase PdaA (EC:3.5.1.41)
Putative delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJW3_9FIRM
Putative delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:CCY12846.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_562_15
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12835..14748
DNA (1914bp) protein (638aa)
Oligopeptide transporter OPT family n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YN88_9FIRM
Oligopeptide transporter OPT family {ECO:0000313|EMBL:CDA28330.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
putative oligopeptide transporter, OPT family
L2_013_122G1_scaffold_562_16
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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14831..15178
DNA (348bp) protein (116aa)
Coenzyme PQQ synthesis protein D (PqqD) n=5 Tax=Clostridiales RepID=D4MWN1_9FIRM
Coenzyme PQQ synthesis protein D (PqqD).
Uncharacterized protein {ECO:0000313|EMBL:EFV16491.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_013_122G1_scaffold_562_17
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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15212..15580
DNA (369bp) protein (123aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0P3J1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV16490.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_013_122G1_scaffold_562_18
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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15683..17125
DNA (1443bp) protein (481aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Aminoacyl-histidine dipeptidase n=2 Tax=Lachnospiraceae RepID=E5VL00_9FIRM
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:EFV16489.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_013_122G1_scaffold_562_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17188..18300
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HHV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29315.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Enterochelin esterase and related enzymes
L2_013_122G1_scaffold_562_20
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18503..23530
DNA (5028bp) protein (1676aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JLG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT28738.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Glycosidases
L2_013_122G1_scaffold_562_21
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23590..23859)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G6Q6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY12848.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_122G1_scaffold_562_22
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24402..25304
DNA (903bp) protein (301aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Cysteine synthase n=1 Tax=Roseburia sp. CAG:380 RepID=R6WFY1_9FIRM
cysteine synthase A
L2_013_122G1_scaffold_562_23
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25499..26581
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAB2_9FIRM
L2_013_122G1_scaffold_562_24
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26711..27322)
DNA (612bp) protein (204aa)
Putative sporulation protein YyaC n=2 Tax=Eubacterium RepID=C0ESG6_9FIRM
Putative sporulation protein YyaC {ECO:0000313|EMBL:EEG37794.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
sporulation protein YyaC
L2_013_122G1_scaffold_562_25
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27570..28919
DNA (1350bp) protein (450aa)
LysM domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESG8_9FIRM
LysM domain protein {ECO:0000313|EMBL:EEG37796.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
LysM domain.
L2_013_122G1_scaffold_562_26
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29022..30257
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GCV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19081.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
Displaying 26 items

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