ggKbase home page

L2_013_122G1_scaffold_706

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_706_1
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

2..304
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EE93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98868.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_013_122G1_scaffold_706_2
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(462..662)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BF91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG87936.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L2_013_122G1_scaffold_706_3
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(915..1382)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TLT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64319.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L2_013_122G1_scaffold_706_4
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1407..2657)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003798448
Bacterial transcriptional activator domain protein {ECO:0000313|EMBL:EEG87939.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Transcriptional regulatory protein, C terminal./Bacterial transcriptional activator domain.
L2_013_122G1_scaffold_706_5
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2779..3627)
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0ESJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18155.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
beta-lactamase superfamily metal-dependent hydrolase
L2_013_122G1_scaffold_706_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3633..5342)
DNA (1710bp) protein (570aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAK3_9FIRM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CCY12934.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_706_7
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5409..6236)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G709_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY12933.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_122G1_scaffold_706_8
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6396..6839)
DNA (444bp) protein (148aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
rbsD; putative D-ribose pyranase (EC:5.5.1.-)
D-ribose pyranase n=2 Tax=Eubacterium RepID=C0ESJ1_9FIRM
L2_013_122G1_scaffold_706_9
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6977..7240)
DNA (264bp) protein (88aa)
30S ribosomal protein S18 n=3 Tax=Eubacterium RepID=C0ESJ0_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
rpsR; 30S ribosomal protein S18
L2_013_122G1_scaffold_706_10
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7269..7760)
DNA (492bp) protein (164aa)
Single-stranded DNA-binding protein n=2 Tax=Eubacterium RepID=C0ESI9_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
single-strand binding protein
L2_013_122G1_scaffold_706_11
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7778..8065)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=3 Tax=Eubacterium RepID=R5G6J1_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
30S ribosomal protein S6
L2_013_122G1_scaffold_706_12
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8176..8355)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY12929.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_122G1_scaffold_706_13
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8544..13091)
DNA (4548bp) protein (1516aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G701_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY12928.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_706_14
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13118..14962)
DNA (1845bp) protein (615aa)
Serine/threonine protein kinase (EC:2.7.11.1)
Kinase domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GJC4_9FIRM
Kinase domain protein {ECO:0000313|EMBL:CCY12927.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
L2_013_122G1_scaffold_706_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15222..16301
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GAJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY12924.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_122G1_scaffold_706_16
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16429..17769)
DNA (1341bp) protein (447aa)
Butyryl-CoA:acetate CoA-transferase {ECO:0000313|EMBL:EEG37758.1}; EC=2.8.3.- {ECO:0000313|EMBL:EEG37758.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Butyryl-CoA:acetate CoA-transferase n=4 Tax=Bacteria RepID=C0ESI0_9FIRM
Acetyl-CoA hydrolase
L2_013_122G1_scaffold_706_17
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18171..19208)
DNA (1038bp) protein (346aa)
Electron transfer flavoprotein FAD-binding domain protein n=2 Tax=environmental samples RepID=R5GB28_9FIRM
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EEG38042.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
etfA; electron transfer flavoprotein alpha subunit EtfA
L2_013_122G1_scaffold_706_18
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19233..20018)
DNA (786bp) protein (262aa)
Electron transfer flavoprotein domain protein n=2 Tax=Eubacterium RepID=C0ERR5_9FIRM
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:CDB17779.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
electron transfer flavoprotein beta-subunit
L2_013_122G1_scaffold_706_19
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20033..21187)
DNA (1155bp) protein (385aa)
Acyl-CoA dehydrogenases (EC:1.3.8.1)
Acyl-CoA dehydrogenase, C-terminal domain protein n=2 Tax=Eubacterium RepID=C0ERR4_9FIRM
Acyl-CoA dehydrogenase C-terminal domain protein {ECO:0000313|EMBL:CDB17780.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L2_013_122G1_scaffold_706_20
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21306..22145)
DNA (840bp) protein (280aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein n=2 Tax=Eubacterium RepID=C0ERR3_9FIRM
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:EEG38039.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L2_013_122G1_scaffold_706_21
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22225..23010)
DNA (786bp) protein (262aa)
Enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase n=2 Tax=Eubacterium RepID=C0ERR2_9FIRM
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:CDB17782.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L2_013_122G1_scaffold_706_22
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23109..24290)
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferases (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=3 Tax=Eubacterium RepID=C0ERR1_9FIRM
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:CDB17783.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Displaying 22 items

View Taxonomy