ggKbase home page

L2_013_122G1_scaffold_841

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_841_1
unknown

Not on your lists

comp(27..233)
DNA (207bp) protein (69aa)

This feature has no annotations

L2_013_122G1_scaffold_841_2
unknown

Not on your lists

comp(292..438)
DNA (147bp) protein (49aa)

This feature has no annotations

L2_013_122G1_scaffold_841_3
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(728..1972)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IUP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25645.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L2_013_122G1_scaffold_841_4
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1965..2681)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IV01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25646.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
LytTr DNA-binding domain-containing protein
L2_013_122G1_scaffold_841_5
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2784..3488)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G1X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18340.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Predicted integral membrane protein
L2_013_122G1_scaffold_841_6
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3541..3723)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EVI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18341.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L2_013_122G1_scaffold_841_7
unknown

Not on your lists

comp(3865..4662)
DNA (798bp) protein (266aa)

This feature has no annotations

L2_013_122G1_scaffold_841_8
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4772..5299)
DNA (528bp) protein (176aa)
Ethanolamine utilization protein, EutP n=2 Tax=Eubacterium RepID=C0EVI3_9FIRM
Ethanolamine utilization protein, EutP {ECO:0000313|EMBL:EEG36838.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
ethanolamine utilization protein
L2_013_122G1_scaffold_841_9
unknown

Not on your lists

comp(5292..5585)
DNA (294bp) protein (98aa)

This feature has no annotations

L2_013_122G1_scaffold_841_10
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5628..6731)
DNA (1104bp) protein (368aa)
Glycosyl hydrolase family 25 n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GMD9_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CCY13942.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L2_013_122G1_scaffold_841_11
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7007..7504)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JF38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29757.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
CarD-like/TRCF domain.
L2_013_122G1_scaffold_841_12
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7704..8357)
DNA (654bp) protein (218aa)
Putative ethanolamine utilization protein EutL n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GDD9_9FIRM
Putative ethanolamine utilization protein EutL {ECO:0000313|EMBL:CCY13939.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
eutL; putative carboxysome-related structural protein with role in ethanolamine utilization
L2_013_122G1_scaffold_841_13
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8453..9106)
DNA (654bp) protein (218aa)
BMC domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVH4_9FIRM
BMC domain protein {ECO:0000313|EMBL:EEG36829.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
microcompartments protein
L2_013_122G1_scaffold_841_14
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9168..10304)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GMD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13937.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_122G1_scaffold_841_15
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10424..11467
DNA (1044bp) protein (348aa)
SH3 domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GB13_9FIRM
SH3 domain protein {ECO:0000313|EMBL:CDB18804.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
peptidase, M23/M37
L2_013_122G1_scaffold_841_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11536..12183)
DNA (648bp) protein (216aa)
Hydrolase NUDIX family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G9T6_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CCY13933.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_122G1_scaffold_841_17
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12420..13820
DNA (1401bp) protein (467aa)
Transcriptional regulator GntR family n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GMX3_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCY13931.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
transcriptional regulator with HTH domain and aminotransferase domain
L2_013_122G1_scaffold_841_18
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13916..14998)
DNA (1083bp) protein (361aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Uncharacterized protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6RUA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC38032.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
L2_013_122G1_scaffold_841_19
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15299..16495
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13161.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Predicted permease
L2_013_122G1_scaffold_841_20
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16684..19269)
DNA (2586bp) protein (862aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C5R4_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48102.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L2_013_122G1_scaffold_841_21
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19281..19544)
DNA (264bp) protein (88aa)
copper-sensing transcriptional repressor CsoR n=1 Tax=Blautia producta RepID=UPI0003660943
Uncharacterized protein {ECO:0000313|EMBL:CCX58920.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L2_013_122G1_scaffold_841_22
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19851..20396
DNA (546bp) protein (182aa)
RNA polymerase factor sigma C n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GG94_9FIRM
RNA polymerase factor sigma C {ECO:0000313|EMBL:CCY14744.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L2_013_122G1_scaffold_841_23
unknown

Not on your lists

20397..21218
DNA (822bp) protein (274aa)

This feature has no annotations

Displaying 23 items

View Taxonomy