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L2_013_122G1_scaffold_1218

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_1218_1
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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131..928
DNA (798bp) protein (266aa)
Sporulation transcription factor Spo0A n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R462_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
sporulation transcription factor Spo0A
L2_013_122G1_scaffold_1218_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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1007..2449
DNA (1443bp) protein (481aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMI4_9FIRM
L2_013_122G1_scaffold_1218_3
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2703..3743
DNA (1041bp) protein (347aa)
recA protein (EC:3.6.3.8)
Protein RecA n=1 Tax=Blautia sp. CAG:37 RepID=R7JV09_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L2_013_122G1_scaffold_1218_4
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3740..4375
DNA (636bp) protein (212aa)
Regulatory protein RecX n=1 Tax=Blautia sp. CAG:37 RepID=R7JTZ6_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
recX; recombination regulator RecX
L2_013_122G1_scaffold_1218_5
unknown

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comp(4495..4614)
DNA (120bp) protein (40aa)

This feature has no annotations

L2_013_122G1_scaffold_1218_6
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5415..6980
DNA (1566bp) protein (522aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Ribonuclease Y n=1 Tax=Blautia sp. CAG:37 RepID=R7JU38_9FIRM
metal dependent phosphohydrolase
L2_013_122G1_scaffold_1218_7
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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7038..7721
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RML5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34112.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_013_122G1_scaffold_1218_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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7767..8858
DNA (1092bp) protein (364aa)
Tyrosine recombinase XerC n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R090_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
tyrosine recombinase XerD subunit
L2_013_122G1_scaffold_1218_9
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

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8882..9079
DNA (198bp) protein (66aa)
Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
L2_013_122G1_scaffold_1218_10
unknown

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comp(9001..9210)
DNA (210bp) protein (70aa)

This feature has no annotations

L2_013_122G1_scaffold_1218_11
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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9259..10083
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BHH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65236.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
cell wall-associated hydrolase
L2_013_122G1_scaffold_1218_12
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10183..11217)
DNA (1035bp) protein (345aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Blautia sp. CAG:37 RepID=R7JU33_9FIRM
L2_013_122G1_scaffold_1218_13
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(11483..13000)
DNA (1518bp) protein (506aa)
Putative stage V sporulation protein B n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYT3_9FIRM
Putative stage V sporulation protein B {ECO:0000313|EMBL:CCZ34115.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L2_013_122G1_scaffold_1218_14
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13159..13662
DNA (504bp) protein (168aa)
Rrf2 family protein putative transcriptional regulator n=1 Tax=Blautia sp. CAG:37 RepID=R7JXE0_9FIRM
Rrf2 family protein putative transcriptional regulator {ECO:0000313|EMBL:CDE67482.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
transcriptional regulator, BadM/Rrf2 family
L2_013_122G1_scaffold_1218_15
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13659..13925
DNA (267bp) protein (89aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Blautia sp. CAG:37 RepID=R7JUZ9_9FIRM
Displaying 15 items

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