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L2_013_122G1_scaffold_801

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_122G1_scaffold_801_1
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(141..461)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JM03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE64633.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Domain of Unknown Function (DUF1540).
L2_013_122G1_scaffold_801_2
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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811..2172
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VLK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93046.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L2_013_122G1_scaffold_801_3
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2335..4272)
DNA (1938bp) protein (646aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Blautia sp. CAG:37 RepID=R7JLT7_9FIRM
L2_013_122G1_scaffold_801_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4727..5632)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01261.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_013_122G1_scaffold_801_5
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5681..6043)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LGX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60037.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L2_013_122G1_scaffold_801_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6215..7237)
DNA (1023bp) protein (341aa)
LD-carboxypeptidase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B9F6_9CLOT
LD-carboxypeptidase {ECO:0000313|EMBL:ERI68840.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF
L2_013_122G1_scaffold_801_7
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7328..7807)
DNA (480bp) protein (160aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
S-ribosylhomocysteinase (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R7P7_9FIRM
L2_013_122G1_scaffold_801_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7917..9341)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036CA941
Uncharacterized protein {ECO:0000313|EMBL:KJF39927.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_013_122G1_scaffold_801_9
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9383..9598)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Caldibacillus debilis RepID=UPI0003625664
hypothetical protein
XRE family transcriptional regulator {ECO:0000313|EMBL:AIQ64327.1}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
L2_013_122G1_scaffold_801_10
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9611..10093)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003770C11
Uncharacterized protein {ECO:0000313|EMBL:CDC70621.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Protein of unknown function (DUF3036).
L2_013_122G1_scaffold_801_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10550..12079)
DNA (1530bp) protein (510aa)
Xylan 1,4-beta-xylosidase (EC:3.2.1.37)
Glycosyl hydrolase, family 43 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KSA1_9FIRM
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:ERJ94960.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L2_013_122G1_scaffold_801_12
unknown

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comp(12163..12294)
DNA (132bp) protein (44aa)

This feature has no annotations

L2_013_122G1_scaffold_801_13
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12281..13801)
DNA (1521bp) protein (507aa)
Beta-xylosidase (EC:3.2.1.37)
Glycosyl hydrolase family 39 n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CC91_9CLOT
Glycosyl hydrolase family 39 {ECO:0000313|EMBL:ERI66867.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_013_122G1_scaffold_801_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14023..15420)
DNA (1398bp) protein (466aa)
xylan 1,4-beta-xylosidase (EC:3.2.1.37)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G925_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01676.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_013_122G1_scaffold_801_15
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15578..16447
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9ISP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24945.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
AraC family transcriptional regulator
L2_013_122G1_scaffold_801_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16673..17173)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZB0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49754.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted flavin-nucleotide-binding protein
L2_013_122G1_scaffold_801_17
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17235..19022)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79954.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
metallopeptidase, family M24
L2_013_122G1_scaffold_801_18
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19121..19621)
DNA (501bp) protein (167aa)
Transcription elongation factor GreA n=1 Tax=Blautia sp. CAG:37 RepID=R7JQM8_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
transcription elongation factor GreA
L2_013_122G1_scaffold_801_19
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19709..21232)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6G6Z9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB20090.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
hypothetical protein
L2_013_122G1_scaffold_801_20
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21232..21915)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JUH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE67276.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
conserved hypothetical protein TIGR00257
Displaying 20 items

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