ggKbase home page

L2_013_245G1_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_37_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

646..1074
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67235.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
PTS mannose transporter subunit IIA
L2_013_245G1_scaffold_37_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1092..2309
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67236.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
glycosyl Hydrolase Family 88 family protein
L2_013_245G1_scaffold_37_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2343..2837
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67237.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
PTS system sorbose subIIB component family protein
L2_013_245G1_scaffold_37_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2866..3660
DNA (795bp) protein (265aa)
PTS system sorbose-specific iic component n=3 Tax=Lachnospiraceae RepID=A7B087_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47474.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PTS system sorbose-specific iic component family protein
L2_013_245G1_scaffold_37_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3650..4456
DNA (807bp) protein (269aa)
PTS system mannose/fructose/sorbose family IID component n=2 Tax=Ruminococcus gnavus RepID=A7B088_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17279.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_013_245G1_scaffold_37_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4539..6527
DNA (1989bp) protein (663aa)
Heparinase II/III-like protein n=3 Tax=Lachnospiraceae RepID=A7B089_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47472.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
heparinase II/III-like family protein
L2_013_245G1_scaffold_37_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6552..7559
DNA (1008bp) protein (336aa)
Transcriptional regulator, LacI family n=2 Tax=Lachnospiraceae RepID=A7B090_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47471.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
helix-turn-helix family protein
L2_013_245G1_scaffold_37_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7577..8359
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JXS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47470.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_013_245G1_scaffold_37_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8368..8814
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TN97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67243.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
acetyltransferase
L2_013_245G1_scaffold_37_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8809..10050)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67244.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
two-component system, response regulator YesN
L2_013_245G1_scaffold_37_11

Not on your lists

10204..12471
DNA (2268bp) protein (756aa)
C7D2-BG protein {ECO:0000313|EMBL:CBJ55485.1}; EC=3.2.1.31 {ECO:0000313|EMBL:CBJ55485.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
C7D2-BG protein n=1 Tax=uncultured bacterium RepID=D5GU72_9BACT
L2_013_245G1_scaffold_37_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12515..13909
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7X1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67246.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L2_013_245G1_scaffold_37_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14085..14792
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BR76_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17287.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_013_245G1_scaffold_37_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14764..16038
DNA (1275bp) protein (425aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQ23_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47464.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
integral membrane sensor signal transduction histidine kinase
L2_013_245G1_scaffold_37_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16087..16230)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B098_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78564.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_013_245G1_scaffold_37_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16469..18769
DNA (2301bp) protein (767aa)
Cadmium-translocating P-type ATPase n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BQ97_RUMGN
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:ETD17289.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_013_245G1_scaffold_37_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18952..19311
DNA (360bp) protein (120aa)
Transcriptional regulator, ArsR family n=4 Tax=Clostridiales RepID=A7B0A1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47462.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_013_245G1_scaffold_37_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19314..21173
DNA (1860bp) protein (620aa)
Cadmium-translocating P-type ATPase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JXR1_9FIRM
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:EGN47461.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
cadA; Cadmium-translocating P-type ATPase
L2_013_245G1_scaffold_37_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21186..21734
DNA (549bp) protein (183aa)
Tetratricopeptide repeat protein n=3 Tax=Lachnospiraceae RepID=A7B0A3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47460.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Tetratricopeptide repeat.
L2_013_245G1_scaffold_37_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21824..22402
DNA (579bp) protein (193aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BQ30_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47459.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L2_013_245G1_scaffold_37_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22403..23629
DNA (1227bp) protein (409aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDN78571.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDN78571.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Antioxidant, AhpC/TSA family n=3 Tax=Lachnospiraceae RepID=A7B0A5_RUMGN
cytochrome c biogenesis protein transmembrane region
L2_013_245G1_scaffold_37_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23640..24881
DNA (1242bp) protein (414aa)
GTPase HflX n=2 Tax=Clostridiales RepID=F7JXQ7_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
GTP-binding protein HflX
L2_013_245G1_scaffold_37_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24891..26006)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67256.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
vitamin-B12 independent methionine synthase
L2_013_245G1_scaffold_37_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26149..26874)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BQA7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17299.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Ethanolamine utilization protein
L2_013_245G1_scaffold_37_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26906..27637)
DNA (732bp) protein (244aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67258.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_37_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27848..28447
DNA (600bp) protein (200aa)
HD domain protein n=3 Tax=Lachnospiraceae RepID=A7B0B2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47450.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
metal dependent phosphohydrolase
L2_013_245G1_scaffold_37_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28413..29198
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67260.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ATPases involved in chromosome partitioning
L2_013_245G1_scaffold_37_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29206..30165
DNA (960bp) protein (320aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7Y7_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ67261.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC-type DNA-binding domain-containing proteins
L2_013_245G1_scaffold_37_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30851..31714)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UED8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67262.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcriptional regulator
L2_013_245G1_scaffold_37_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31910..32773
DNA (864bp) protein (288aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
4-deoxy-L-threo-5-hexulose uronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNB4_9FIRM
Displaying items 1-30 of 121 in total

View Taxonomy