name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L2_013_245G1_scaffold_95_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
119..871
|
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PGI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23463.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transposase for insertion sequence element IS801
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L2_013_245G1_scaffold_95_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
868..1014
|
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PGI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23463.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
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L2_013_245G1_scaffold_95_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1236..2837)
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Type I restriction-modification system, M subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=D6MGB2_9CLOT
Type I restriction-modification protein subunit M {ECO:0000313|EMBL:KHD17169.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
type I restriction-modification system, M subunit
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L2_013_245G1_scaffold_95_4
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2865..4016)
|
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9E4C7_CLOK1
Type I restriction enzyme, specificity subunit
Type I restriction enzyme, specificity subunit {ECO:0000313|EMBL:AKA70472.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
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L2_013_245G1_scaffold_95_5
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4009..5013)
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Toxin Fic n=1 Tax=Carnobacterium sp. WN1359 RepID=U5SFL2_9LACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA70473.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
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L2_013_245G1_scaffold_95_6
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(5026..8244)
|
Type I restriction-modification system restriction subunit HsdR2 {ECO:0000313|EMBL:AFA48491.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AFA48491.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
hsdR2; type I restriction-modification system restriction subunit HsdR2 (EC:3.1.21.3)
Type I restriction-modification system restriction subunit HsdR2 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHW1_ACEWD
|
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L2_013_245G1_scaffold_95_7
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8225..8815)
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hsdA; type I restriction-modification system methylase subunit HsdA (EC:3.1.21.3)
Type I restriction-modification system methylase subunit HsdA n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHW0_ACEWD
Restriction endonuclease S subunits {ECO:0000313|EMBL:CDL90891.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
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L2_013_245G1_scaffold_95_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
9018..9347
|
Transcriptional regulator, PadR family n=2 Tax=Clostridium RepID=B6FTU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23370.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional regulator, PadR family
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|
L2_013_245G1_scaffold_95_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
9354..10676
|
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PY40_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23371.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Bacterial cell division membrane protein
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L2_013_245G1_scaffold_95_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(10692..13199)
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Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QN35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23372.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
|
|
L2_013_245G1_scaffold_95_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(13203..14351)
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Uncharacterized protein n=2 Tax=Clostridium RepID=B6FTV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80554.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
|
|
L2_013_245G1_scaffold_95_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(14480..17035)
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Histidine kinase A domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTV2_9CLOT
Histidine kinase A domain protein {ECO:0000313|EMBL:EEA80555.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Signal transduction histidine kinase
|
|
L2_013_245G1_scaffold_95_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(17048..17743)
|
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FTV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23375.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
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L2_013_245G1_scaffold_95_14
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(17867..18661)
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Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD91_9FIRM
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L2_013_245G1_scaffold_95_15
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(18682..21054)
|
Pyruvate-formate lyase (EC:2.3.1.54)
Pyruvate formate-lyase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD88_9FIRM
Pyruvate formate-lyase {ECO:0000313|EMBL:EGG80872.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
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|
L2_013_245G1_scaffold_95_16
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(21059..21970)
|
Glycyl-radical enzyme activating protein family n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD87_9FIRM
Glycyl-radical enzyme activating protein family {ECO:0000313|EMBL:EGG80871.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
glycyl-radical enzyme activating family protein
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|
L2_013_245G1_scaffold_95_17
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
22148..22720
|
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80870.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DNA-binding protein
|
|
L2_013_245G1_scaffold_95_18
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(23536..24024)
|
Acetyltransferase, GNAT family n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CKV8_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFE91969.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
acetyltransferase
|
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L2_013_245G1_scaffold_95_19
unknown
|
Not on your lists |
comp(24432..24701)
|
hypothetical protein
|
|
L2_013_245G1_scaffold_95_20
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
24979..25071
|
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U6S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD54956.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
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L2_013_245G1_scaffold_95_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(25304..26650)
|
MATE domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTV5_9CLOT
MATE domain protein {ECO:0000313|EMBL:EEA80558.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Na+-driven multidrug efflux pump
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L2_013_245G1_scaffold_95_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
26749..27519
|
Transcriptional regulator, MerR family n=2 Tax=Clostridium RepID=B6FTV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22854.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted transcriptional regulators
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L2_013_245G1_scaffold_95_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
27513..28721
|
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PES8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22853.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sodium/proton antiporter, CPA1 family (TC 2.A.36)
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L2_013_245G1_scaffold_95_24
unknown
|
Not on your lists |
comp(28765..28866)
|
This feature has no annotations |
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L2_013_245G1_scaffold_95_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(29130..30071)
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Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QN39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23377.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Lysophospholipase
|
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L2_013_245G1_scaffold_95_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(30084..31460)
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Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=2 Tax=Clostridium RepID=B6FTV9_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
|
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L2_013_245G1_scaffold_95_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(31593..32273)
|
TIGR00266 family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTW0_9CLOT
TIGR00266 family protein {ECO:0000313|EMBL:EEA80563.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
conserved hypothetical protein TIGR00266
|
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L2_013_245G1_scaffold_95_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(32296..33168)
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Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTW1_9CLOT
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L2_013_245G1_scaffold_95_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(33178..33948)
|
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase, TatD family n=2 Tax=Clostridium RepID=B6FTW2_9CLOT
Hydrolase, TatD family {ECO:0000313|EMBL:EEA80565.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
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L2_013_245G1_scaffold_95_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(33950..34936)
|
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=2 Tax=Clostridium RepID=B6FTW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23382.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
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