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L2_013_245G1_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_111_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..703
DNA (702bp) protein (234aa)
Putative uncharacterized protein (Fragment) n=2 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7K0E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44670.1}; Flags: Fragment;; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_013_245G1_scaffold_111_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(744..1613)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=2 Tax=Ruminococcus gnavus RepID=A7B5D7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17660.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
AraC family transcriptional regulator
L2_013_245G1_scaffold_111_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1940..3217
DNA (1278bp) protein (426aa)
Oxidoreductase NAD-binding domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWI5_9FIRM
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CCZ67674.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
oxidoreductase
L2_013_245G1_scaffold_111_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3266..5284
DNA (2019bp) protein (673aa)
Phosphotransferase enzyme family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPT7_9FIRM
Phosphotransferase enzyme family {ECO:0000313|EMBL:CCZ67675.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_013_245G1_scaffold_111_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5338..6003)
DNA (666bp) protein (222aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U931_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_111_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6035..7405)
DNA (1371bp) protein (457aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFR5_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_111_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7406..9172)
DNA (1767bp) protein (589aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPH1_9FIRM
L2_013_245G1_scaffold_111_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9191..9508)
DNA (318bp) protein (106aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
ATP synthase subunit n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWJ0_9FIRM
ATP synthase subunit {ECO:0000313|EMBL:CCZ67679.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_111_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9501..10472)
DNA (972bp) protein (324aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67680.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_111_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10526..11119)
DNA (594bp) protein (198aa)
Archaeal/vacuolar-type H+-ATPase subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E n=4 Tax=Clostridiales RepID=A7B5C2_RUMGN
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_013_245G1_scaffold_111_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11160..11645)
DNA (486bp) protein (162aa)
V-type sodium ATPase, K subunit {ECO:0000313|EMBL:EDN76863.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EDN76863.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATP synthase subunit C. (EC:3.6.3.14)
V-type sodium ATPase, K subunit n=4 Tax=Clostridiales RepID=A7B5C1_RUMGN
L2_013_245G1_scaffold_111_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11648..13660)
DNA (2013bp) protein (671aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPH5_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_111_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13690..14001)
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B5B9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44690.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_013_245G1_scaffold_111_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14260..15285)
DNA (1026bp) protein (342aa)
Kinase, PfkB family n=4 Tax=Clostridiales RepID=A7B5B7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44691.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PfkB domain-containing protein
L2_013_245G1_scaffold_111_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15474..15974)
DNA (501bp) protein (167aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
tRNA (Cytidine(34)-2'-O)-methyltransferase n=4 Tax=Clostridiales RepID=V8BS50_RUMGN
L2_013_245G1_scaffold_111_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15968..17149)
DNA (1182bp) protein (394aa)
Aminotransferase, class I/II n=4 Tax=Clostridiales RepID=A7B5B4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17639.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_013_245G1_scaffold_111_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17149..17649)
DNA (501bp) protein (167aa)
Transcriptional regulator, AsnC family n=4 Tax=Clostridiales RepID=A7B5B3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44694.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulatory protein, AsnC family (AsnC)
L2_013_245G1_scaffold_111_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17664..18701)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B5B2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17637.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Hydrogenase maturation factor
L2_013_245G1_scaffold_111_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18899..19525)
DNA (627bp) protein (209aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Endonuclease III n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPU7_9FIRM
hypothetical protein
L2_013_245G1_scaffold_111_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19522..21282)
DNA (1761bp) protein (587aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Radical SAM domain protein n=3 Tax=Lachnospiraceae RepID=A7B5A9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44697.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_013_245G1_scaffold_111_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21628..22110)
DNA (483bp) protein (161aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=4 Tax=Clostridiales RepID=A7B5A8_RUMGN
Cytosine/adenosine deaminases
L2_013_245G1_scaffold_111_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22206..23021
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BR19_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44699.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_013_245G1_scaffold_111_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23014..24426)
DNA (1413bp) protein (471aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Putative dGTPase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWK4_9FIRM
Putative dGTPase {ECO:0000313|EMBL:CCZ67694.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_111_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24440..25108)
DNA (669bp) protein (223aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B5A4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44701.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_013_245G1_scaffold_111_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25282..26073)
DNA (792bp) protein (264aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U943_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67696.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_111_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26061..26702)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67697.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
putative 4'-phosphopantetheinyl transferase
L2_013_245G1_scaffold_111_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26707..28326)
DNA (1620bp) protein (540aa)
Diguanylate cyclase (GGDEF) domain protein n=3 Tax=Lachnospiraceae RepID=A7B5A0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17628.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
diguanylate cyclase (GGDEF) domain
L2_013_245G1_scaffold_111_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28558..29184)
DNA (627bp) protein (209aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.32)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67699.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_111_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29184..30083)
DNA (900bp) protein (300aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.32)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67700.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_111_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30154..31419)
DNA (1266bp) protein (422aa)
Anion transporter n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U947_9FIRM
Anion transporter {ECO:0000313|EMBL:CCZ67701.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
anion transporter
Displaying items 1-30 of 72 in total

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