ggKbase home page

L2_013_245G1_scaffold_215

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_215_1
unknown

Not on your lists

2..148
DNA (147bp) protein (49aa)

This feature has no annotations

L2_013_245G1_scaffold_215_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

135..335
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3Y7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77355.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_013_245G1_scaffold_215_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

345..734
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3Y6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77354.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_013_245G1_scaffold_215_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

748..1575
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3Y5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77353.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_013_245G1_scaffold_215_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1623..1979
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3Y4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77352.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_013_245G1_scaffold_215_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1986..3929
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3Y3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77351.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Domain of unknown function DUF87.
L2_013_245G1_scaffold_215_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3883..4689
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3Y3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77351.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transfer complex protein
L2_013_245G1_scaffold_215_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4699..6705
DNA (2007bp) protein (669aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3Y2_RUMGN
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EDN77350.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Spr; cell wall-associated hydrolase
L2_013_245G1_scaffold_215_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6800..7297
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3Y0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77348.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_013_245G1_scaffold_215_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7549..7848
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UB70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68406.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_215_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7894..8181
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68407.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_215_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8182..8562
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B3X5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77343.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_013_245G1_scaffold_215_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8534..9967
DNA (1434bp) protein (478aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B3X4_RUMGN
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDN77342.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_013_245G1_scaffold_215_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9946..10737
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C1L8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20962.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_013_245G1_scaffold_215_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10742..11281
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C2L5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44004.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_013_245G1_scaffold_215_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11284..12582
DNA (1299bp) protein (433aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C1T2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44003.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_013_245G1_scaffold_215_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12586..14856
DNA (2271bp) protein (757aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C0S6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44002.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
TraG/TraD family protein
L2_013_245G1_scaffold_215_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15081..15638
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67747.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_215_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15750..16079
DNA (330bp) protein (110aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U986_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ67746.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Helix-turn-helix.
L2_013_245G1_scaffold_215_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16115..17386
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67745.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
sensor histidine kinase virs
L2_013_245G1_scaffold_215_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18228..18773
DNA (546bp) protein (182aa)
Accessory protein regulator protein B n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWQ1_9FIRM
Accessory protein regulator protein B {ECO:0000313|EMBL:CCZ67744.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Accessory gene regulator B.
L2_013_245G1_scaffold_215_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18905..19630
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67742.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
LytTr family DNA-binding response regulator
L2_013_245G1_scaffold_215_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19836..19979
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BP58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC23248.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_013_245G1_scaffold_215_24
unknown

Not on your lists

20184..20483
DNA (300bp) protein (100aa)

This feature has no annotations

L2_013_245G1_scaffold_215_25
unknown

Not on your lists

21194..21598
DNA (405bp) protein (135aa)

This feature has no annotations

L2_013_245G1_scaffold_215_26
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22023..22991
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GKB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI54808.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
L2_013_245G1_scaffold_215_27
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22988..23779
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IMJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23026.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L2_013_245G1_scaffold_215_28
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23772..24605
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XNZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06152.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L2_013_245G1_scaffold_215_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24607..25251
DNA (645bp) protein (215aa)
Efflux ABC transporter, ATP-binding protein n=2 Tax=Clostridium botulinum RepID=C6DXW8_CLOBO
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEH99182.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT12695.;"
ABC transporter
L2_013_245G1_scaffold_215_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25392..26798
DNA (1407bp) protein (469aa)
ErfK/YbiS/YcfS/YnhG n=3 Tax=Lachnospiraceae RepID=A7AZ78_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49788.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
Displaying items 1-30 of 69 in total

View Taxonomy