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L2_013_245G1_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_219_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..931
DNA (930bp) protein (310aa)
Zinc finger CHC2-family protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CCF6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05405.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

935..1285
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D8X7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05406.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1386..3941
DNA (2556bp) protein (852aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CRZ4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05407.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_4
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3945..4271
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CF74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA74305.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
hypothetical protein
L2_013_245G1_scaffold_219_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4240..6915
DNA (2676bp) protein (892aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CN78_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05408.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6912..8072
DNA (1161bp) protein (387aa)
Ig domain protein group 2 domain protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CCF1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05409.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8091..8393
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D8X0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05410.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8405..8971
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CRZ1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05411.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8974..9345
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CF69_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05412.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9695..10120
DNA (426bp) protein (142aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05413.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10123..13326
DNA (3204bp) protein (1068aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UGQ3_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05414.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13339..15849
DNA (2511bp) protein (837aa)
TRAG family protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D1W4_9FIRM
Protein virD4
Protein virD4 {ECO:0000313|EMBL:CCO05415.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15836..16582
DNA (747bp) protein (249aa)
Regulatory protein Crp n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CJC7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05416.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16797..17879
DNA (1083bp) protein (361aa)
Putative site-specific recombinase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KRG8_OSCVS
Phage integrase
Phage integrase {ECO:0000313|EMBL:CCO05417.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17957..18229
DNA (273bp) protein (91aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1GZD6_9CLOT
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CCO05420.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_16
unknown

Not on your lists

comp(18333..19232)
DNA (900bp) protein (300aa)

This feature has no annotations

L2_013_245G1_scaffold_219_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20508..22682
DNA (2175bp) protein (725aa)
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CCO05421.1}; EC=1.17.4.2 {ECO:0000313|EMBL:CCO05421.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Ribonucleoside-triphosphate reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDN3_9FIRM
L2_013_245G1_scaffold_219_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22938..23456
DNA (519bp) protein (173aa)
nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2Y8_9FIRM
L2_013_245G1_scaffold_219_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23562..26135)
DNA (2574bp) protein (858aa)
Cation-transporting ATPase (EC:3.6.3.-)
Cation-transporting ATPase {ECO:0000313|EMBL:CCO05423.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05423.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative potassium/sodium efflux P-type ATPase fungal-type n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAI7_9FIRM
L2_013_245G1_scaffold_219_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26479..27021
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6G8_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05425.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27063..27896)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2H3_9CLOT
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05426.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27999..28502)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67803.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_245G1_scaffold_219_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28495..29763)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAI2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05428.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29973..30458
DNA (486bp) protein (162aa)
GtrA-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIX0_9FIRM
GtrA-like protein {ECO:0000313|EMBL:CDC67801.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
putative cell wall teichoic acid glycosylation protein
L2_013_245G1_scaffold_219_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30523..30816)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFQ5_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05430.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30936..32087)
DNA (1152bp) protein (384aa)
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CCO05431.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CCO05431.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T3E9_9FIRM
L2_013_245G1_scaffold_219_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32121..33203)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZU1_9FIRM
L2_013_245G1_scaffold_219_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33590..33769
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U7D5_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05433.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_219_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34015..35538
DNA (1524bp) protein (508aa)
xylB; Xylulokinase (EC:2.7.1.17)
Xylulokinase {ECO:0000313|EMBL:CCO05434.1}; EC=2.7.1.17 {ECO:0000313|EMBL:CCO05434.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Xylulokinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFP8_9FIRM
L2_013_245G1_scaffold_219_30
unknown

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comp(35386..35889)
DNA (504bp) protein (168aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

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