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L2_013_245G1_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_235_1
unknown

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2..496
DNA (495bp) protein (165aa)

This feature has no annotations

L2_013_245G1_scaffold_235_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(685..1146)
DNA (462bp) protein (154aa)
Hsp20/alpha crystallin family protein n=2 Tax=Clostridium RepID=A7VSV2_9CLOT
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDC04115.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Molecular chaperone (small heat shock protein)
L2_013_245G1_scaffold_235_3
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1431..1874)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KKP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67333.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
engC2; GTPase EngC2
L2_013_245G1_scaffold_235_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1901..2332)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W2J0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38756.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
MarR family transcriptional regulator
L2_013_245G1_scaffold_235_5
unknown

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comp(2540..3112)
DNA (573bp) protein (191aa)

This feature has no annotations

L2_013_245G1_scaffold_235_6
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3394..4524)
DNA (1131bp) protein (377aa)
NAD-dependent methanol dehydrogenase (Medh) n=1 Tax=Clostridium sp. CAG:678 RepID=R5L0F1_9CLOT
NAD-dependent methanol dehydrogenase (Medh) {ECO:0000313|EMBL:CCY66537.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
alcohol dehydrogenase, class IV
L2_013_245G1_scaffold_235_7
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4656..5600)
DNA (945bp) protein (315aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase C-subunit n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QJG0_9FIRM
Transketolase C-subunit {ECO:0000313|EMBL:CDC33114.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_013_245G1_scaffold_235_8
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5604..6458)
DNA (855bp) protein (285aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase thiamine diphosphate binding domain protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8W5_9FIRM
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CDC33113.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_013_245G1_scaffold_235_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6471..7748)
DNA (1278bp) protein (426aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J489_9CLOT
Seryl-tRNA synthetase {ECO:0000313|EMBL:CDB52571.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_013_245G1_scaffold_235_10
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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comp(7760..8605)
DNA (846bp) protein (282aa)
ParB-like protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BH57_9FIRM
ParB-like protein {ECO:0000313|EMBL:CDD65104.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
parB-like partition protein
L2_013_245G1_scaffold_235_11
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8641..9402)
DNA (762bp) protein (254aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Clostridium sp. CAG:678 RepID=R5KNM1_9CLOT
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CCY66674.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
cobyrinic acid a,c-diamide synthase
L2_013_245G1_scaffold_235_12
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10003..10845)
DNA (843bp) protein (281aa)
Putative nucleoid occlusion protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KIU3_9CLOT
Putative nucleoid occlusion protein {ECO:0000313|EMBL:CCY66673.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
noc; Nucleoid occlusion protein
L2_013_245G1_scaffold_235_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10952..11656)
DNA (705bp) protein (235aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium leptum CAG:27 RepID=R6NG19_9CLOT
L2_013_245G1_scaffold_235_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(11649..12392)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SPE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48472.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
DNA alkylation repair protein
L2_013_245G1_scaffold_235_15
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12389..14257)
DNA (1869bp) protein (623aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XEK6_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
glucose-inhibited division protein A
L2_013_245G1_scaffold_235_16
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14259..15620)
DNA (1362bp) protein (454aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
tRNA modification GTPase MnmE n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XLG4_9FIRM
tRNA modification GTPase TrmE
L2_013_245G1_scaffold_235_17
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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15899..16834
DNA (936bp) protein (312aa)
fba; fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7ARY5_9FIRM
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CDD63623.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
L2_013_245G1_scaffold_235_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17744..18403)
DNA (660bp) protein (220aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73 5.4.2.1)
Fructose-2 6-bisphosphatase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2V8_9CLOT
Fructose-2 6-bisphosphatase {ECO:0000313|EMBL:CDB52036.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_013_245G1_scaffold_235_19
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

18573..19241
DNA (669bp) protein (223aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BIW9_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDD65088.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
hypothetical protein
L2_013_245G1_scaffold_235_20
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19296..20006)
DNA (711bp) protein (237aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
Methylthioadenosine nucleosidase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KNL3_9CLOT
L2_013_245G1_scaffold_235_21
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20263..20397
DNA (135bp) protein (45aa)
Ribosomal protein L34 n=1 Tax=Clostridium sp. CAG:413 RepID=R6NEW4_9CLOT
Ribosomal protein L34 {ECO:0000256|RuleBase:RU000566}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
LSU ribosomal protein L34P
L2_013_245G1_scaffold_235_22
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20416..20751
DNA (336bp) protein (112aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8Y7_9FIRM
L2_013_245G1_scaffold_235_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20748..21005
DNA (258bp) protein (86aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Clostridium sp. CAG:217 RepID=R6INZ5_9CLOT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_013_245G1_scaffold_235_24
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21017..22012
DNA (996bp) protein (332aa)
Membrane protein insertase YidC/Oxa1 family n=1 Tax=Clostridium sp. CAG:217 RepID=R6J013_9CLOT
Membrane protein insertase YidC/Oxa1 family {ECO:0000313|EMBL:CDB52044.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L2_013_245G1_scaffold_235_25
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22044..23126
DNA (1083bp) protein (361aa)
R3H domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IS45_9CLOT
R3H domain protein {ECO:0000313|EMBL:CDB52045.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Predicted RNA-binding protein
L2_013_245G1_scaffold_235_26
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23241..24209)
DNA (969bp) protein (323aa)
Putative DNA replication protein DnaC n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XUV9_9FIRM
Putative DNA replication protein DnaC {ECO:0000313|EMBL:CDA12596.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
DNA replication protein
L2_013_245G1_scaffold_235_27
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24237..25295)
DNA (1059bp) protein (353aa)
Putative peptidase S10 Flavivirus NS3 serine protease n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQI8_9CLOT
Putative peptidase S10 Flavivirus NS3 serine protease {ECO:0000313|EMBL:CDB52387.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
primosome subunit DnaD
L2_013_245G1_scaffold_235_28
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25723..28254
DNA (2532bp) protein (844aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IS93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52105.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_013_245G1_scaffold_235_29
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28398..29069)
DNA (672bp) protein (224aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJY1_9CLOT
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDC12483.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
helix-turn-helix domain-containing protein
L2_013_245G1_scaffold_235_30
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29380..30255
DNA (876bp) protein (292aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XDD7_9FIRM
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CDA12885.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
HAD-superfamily hydrolase
Displaying items 1-30 of 48 in total

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