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L2_013_245G1_scaffold_272

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_272_1
unknown

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3..80
DNA (78bp) protein (26aa)

This feature has no annotations

L2_013_245G1_scaffold_272_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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127..630
DNA (504bp) protein (168aa)
Cell division protein FtsL n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9S2_9FIRM
ftsL; Putative cell division protein FtsL
Putative cell division protein FtsL {ECO:0000313|EMBL:CCO04034.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

786..3119
DNA (2334bp) protein (778aa)
ftsI; Cell division protein FtsI/PbpB; Transpeptidase (EC:2.4.1.129)
Cell division protein FtsI/PbpB Transpeptidase {ECO:0000313|EMBL:CCO04035.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CCO04035.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2M4_9FIRM
L2_013_245G1_scaffold_272_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3145..4593
DNA (1449bp) protein (483aa)
murE; UDP-N-acetylmuramyl-tripeptide synthetase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000313|EMBL:CCO04036.1};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF17_9FIRM
L2_013_245G1_scaffold_272_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4737..6098
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6P1_9FIRM
L2_013_245G1_scaffold_272_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6095..7138
DNA (1044bp) protein (348aa)
mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ76_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC66468.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_272_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7163..8389
DNA (1227bp) protein (409aa)
Putative cell division protein FtsW n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9S9_9FIRM
ftsW; Cell division protein FtsW
Cell division protein FtsW {ECO:0000313|EMBL:CCO04039.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8405..9532
DNA (1128bp) protein (376aa)
murG; Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (Glycosyltransferase Family 28 protein ) (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentape ptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2M9_9FIRM
L2_013_245G1_scaffold_272_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9561..10466
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF20_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04041.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10528..11787
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6P7_9FIRM
L2_013_245G1_scaffold_272_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11806..12909
DNA (1104bp) protein (368aa)
POTRA domain protein FtsQ-type n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ84_9FIRM
POTRA domain protein FtsQ-type {ECO:0000313|EMBL:CDC66473.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ftsQ; Cell division protein ftsQ homolog
L2_013_245G1_scaffold_272_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13165..14295
DNA (1131bp) protein (377aa)
Cell division protein FtsZ n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9T6_9FIRM
ftsZ; Cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14615..15604
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66475.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
DivIVA protein
L2_013_245G1_scaffold_272_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15614..16171
DNA (558bp) protein (186aa)
fumA; Fumarate hydratase subunit beta (EC:4.2.1.2)
Hydro-lyase Fe-S type tartrate/fumarate subfamily beta subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF24_9FIRM
Hydro-lyase Fe-S type tartrate/fumarate subfamily beta subunit {ECO:0000313|EMBL:CDC66476.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_272_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16408..16968
DNA (561bp) protein (187aa)
Putative RNA polymerase sigma-H factor n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6Q4_9FIRM
sig5; RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO04047.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17065..17343
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ89_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04048.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17393..18217)
DNA (825bp) protein (275aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9U2_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCO04049.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18318..21320
DNA (3003bp) protein (1001aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
lacZ; Beta-galactosidase (Glycoside Hydrolase Family 2 protein ) (EC:3.2.1.23)
Glycoside hydrolase family 2 TIM barrel n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2P2_9FIRM
L2_013_245G1_scaffold_272_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21331..24816
DNA (3486bp) protein (1162aa)
Glycosyl hydrolase family 2 sugar binding domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF28_9FIRM
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CDC66481.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
glycoside hydrolase family protein
L2_013_245G1_scaffold_272_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24854..25828)
DNA (975bp) protein (325aa)
cbaH; Choloylglycine hydrolase (EC:3.5.1.24)
Penicillin V acylase and related amidases n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6R1_9FIRM
Penicillin V acylase and related amidases {ECO:0000313|EMBL:CDC66482.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_272_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26003..27583
DNA (1581bp) protein (527aa)
cls1; Cardiolipin synthase (EC:2.7.8.-)
Cardiolipin synthase {ECO:0000313|EMBL:CCO04055.1}; EC=2.7.8.- {ECO:0000313|EMBL:CCO04055.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZ93_9FIRM
L2_013_245G1_scaffold_272_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27875..29305
DNA (1431bp) protein (477aa)
Magnesium transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9V0_9FIRM
mgtE1; Magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29806..30342
DNA (537bp) protein (179aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF33_9FIRM
sig6; RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:CCO04057.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30335..31006
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6R8_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04058.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31046..31255
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9V5_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDC66489.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_272_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31271..32482
DNA (1212bp) protein (404aa)
Predicted permease n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2Q7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04060.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32484..33761
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002DD43BC
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04061.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_272_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33775..34437
DNA (663bp) protein (221aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TF38_9FIRM
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDC66491.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_272_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34654..36519)
DNA (1866bp) protein (622aa)
ATPase with chaperone activity ATP-binding subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U6S7_9FIRM
ATPase with chaperone activity ATP-binding subunit {ECO:0000313|EMBL:CDC66492.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ATPase
L2_013_245G1_scaffold_272_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37000..38031
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U4Z9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04065.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 1-30 of 41 in total

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