ggKbase home page

L2_013_245G1_scaffold_326

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_326_1
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35..436
DNA (402bp) protein (134aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=D0TBP3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS18865.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
conserved protein found in conjugate transposon TraB
L2_013_245G1_scaffold_326_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

439..1065
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=D0TBP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS18866.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
traD; hypothetical protein
L2_013_245G1_scaffold_326_3
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1535..1717)
DNA (183bp) protein (61aa)
Histone H1-like protein Hc1 n=1 Tax=Bacteroides gallinarum RepID=UPI0003627BF5
Histone H1 {ECO:0000313|EMBL:KHE40216.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
Histone H1-like protein Hc1.
L2_013_245G1_scaffold_326_4
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1896..2183
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9SJ90_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KHE40217.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
hypothetical protein
L2_013_245G1_scaffold_326_5
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2190..2531
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=3 Tax=Alistipes RepID=D4IL74_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHE40218.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
hypothetical protein
L2_013_245G1_scaffold_326_6
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2601..5267)
DNA (2667bp) protein (889aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037160CF
Helicase conserved C-terminal domain.
Helicase conserved C-terminal domain {ECO:0000313|EMBL:CBK63687.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_013_245G1_scaffold_326_7
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5268..7691)
DNA (2424bp) protein (808aa)
Uncharacterized protein n=2 Tax=Bacteroides xylanisolvens RepID=D4WYF9_9BACE
Putative DNA methylase {ECO:0000313|EMBL:CDM02459.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
DNA methylase
L2_013_245G1_scaffold_326_8
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7782..7955)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9RCG0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY40276.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
L2_013_245G1_scaffold_326_9
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7945..8391)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000361F3E2
Uncharacterized protein {ECO:0000313|EMBL:KHE40219.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
hypothetical protein
L2_013_245G1_scaffold_326_10
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8401..9426)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I8XYU9_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY56080.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
L2_013_245G1_scaffold_326_11
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9511..9699)
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KHE40220.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
L2_013_245G1_scaffold_326_12
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(9910..10740)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AT03_CHLCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB27872.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
L2_013_245G1_scaffold_326_13
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10750..11088)
DNA (339bp) protein (113aa)
Plasmid stabilization system protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IJA8_9BACT
Plasmid stabilization protein {ECO:0000313|EMBL:KHE39846.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
Plasmid stabilization system protein
L2_013_245G1_scaffold_326_14
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11081..11326)
DNA (246bp) protein (82aa)
antitoxin n=1 Tax=Alistipes sp. JC136 RepID=UPI000287BF25
Antitoxin {ECO:0000313|EMBL:KHE39845.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
addiction module antidote protein, CC2985 family
L2_013_245G1_scaffold_326_15
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11411..13183)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5RAL3_9BACE
Conjugal transfer protein TraG {ECO:0000313|EMBL:KHE39844.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
hypothetical protein
L2_013_245G1_scaffold_326_16
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13298..13423)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9HYC9_9BACE
Conjugal transfer protein TraG {ECO:0000313|EMBL:KHE39843.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
hypothetical protein
L2_013_245G1_scaffold_326_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13430..13879)
DNA (450bp) protein (150aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IL82_9BACT
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBK63694.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_013_245G1_scaffold_326_18
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13979..14488)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9H9Y9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY56534.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
Relaxase/Mobilisation nuclease domain.
L2_013_245G1_scaffold_326_19
unknown

Not on your lists

comp(14645..14737)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_013_245G1_scaffold_326_20
Porphyromonas cangingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15059..17599)
DNA (2541bp) protein (847aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037253F8
Uncharacterized protein {ECO:0000313|EMBL:KGN81616.1}; TaxID=36874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cangingivalis.;"
DEAD/DEAH box helicase domain-containing protein
L2_013_245G1_scaffold_326_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17606..18436)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00035DBA5A
Domain of unknown function (DUF1837).
Uncharacterized protein {ECO:0000313|EMBL:CBK63690.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_013_245G1_scaffold_326_22
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18510..19664)
DNA (1155bp) protein (385aa)
ATPase AAA n=1 Tax=Alistipes onderdonkii RepID=UPI00036FBE90
AAA+ superfamily protein {ECO:0000313|EMBL:GAK35634.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
Predicted ATPase (AAA+ superfamily)
L2_013_245G1_scaffold_326_23
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20217..20489)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UTZ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV67383.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L2_013_245G1_scaffold_326_24
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20505..20681)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A398_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS17632.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
L2_013_245G1_scaffold_326_25
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21281..21970
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037CA63C
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBK63696.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_013_245G1_scaffold_326_26
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21951..22328
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002F6DA32
Uncharacterized protein {ECO:0000313|EMBL:KHE40618.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
Protein of unknown function (DUF3408).
L2_013_245G1_scaffold_326_27
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22704..23471
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UTZ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KHE40619.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
hypothetical protein
L2_013_245G1_scaffold_326_28
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23708..23905
DNA (198bp) protein (66aa)
hypothetical protein
Uncharacterized protein id=4582091 bin=GWC2_OP3_44_8 species=unknown genus=Myroides taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Uncharacterized protein {ECO:0000313|EMBL:EGK06080.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
L2_013_245G1_scaffold_326_29
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23910..24269
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037B28A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63700.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_013_245G1_scaffold_326_30
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24232..24402
DNA (171bp) protein (57aa)
Conjugation system ATPase, TraG family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2X7_9FLAO
Conjugative transposon protein TraG
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGO08703.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
Displaying items 1-30 of 53 in total

View Taxonomy