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L2_013_245G1_scaffold_336

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_336_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44..853
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SXY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66018.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_245G1_scaffold_336_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1057..1632
DNA (576bp) protein (192aa)
xpt; xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Xanthine phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T8J2_9FIRM
L2_013_245G1_scaffold_336_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1678..2829
DNA (1152bp) protein (384aa)
Membrane protein Bmp family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDV9_9FIRM
membrane protein, Bmp family
Membrane protein, Bmp family {ECO:0000313|EMBL:CCO05461.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_336_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2983..4518
DNA (1536bp) protein (512aa)
Simple sugar transport system ATP-binding protein (EC:3.6.3.-)
Simple sugar transport system ATP-binding protein {ECO:0000313|EMBL:CCO05462.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05462.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SXZ2_9FIRM
L2_013_245G1_scaffold_336_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4511..5617
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1F8_9FIRM
ABC transporter membrane component
Uncharacterized protein {ECO:0000313|EMBL:CDC66025.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_336_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5610..6569
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5H0_9FIRM
ABC transporter membrane component
ABC transporter membrane component {ECO:0000313|EMBL:CCO05464.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_336_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6760..7083)
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDW8_9FIRM
trxA1; Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077, ECO:0000313|EMBL:CCO05465.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_336_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7101..7298)
DNA (198bp) protein (66aa)
Ferredoxin thioredoxin reductase catalytic beta chain n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5H4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Ferredoxin thioredoxin reductase catalytic beta chain {ECO:0000313|EMBL:CDC66032.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_336_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7329..7868)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66033.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_245G1_scaffold_336_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8344..9579
DNA (1236bp) protein (412aa)
argG; Argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Argininosuccinate synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T8K4_9FIRM
L2_013_245G1_scaffold_336_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9659..10093
DNA (435bp) protein (145aa)
Pentapeptide repeat protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1G9_9FIRM
hypothetical protein
Pentapeptide repeat protein {ECO:0000313|EMBL:CDC66035.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_336_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10201..11574
DNA (1374bp) protein (458aa)
argH; Argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Argininosuccinate lyase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDX2_9FIRM
L2_013_245G1_scaffold_336_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11555..11998
DNA (444bp) protein (148aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY05_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC66038.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_245G1_scaffold_336_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12135..13082
DNA (948bp) protein (316aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000313|EMBL:CCO05472.1}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000313|EMBL:CCO05472.1};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1H3_9FIRM
L2_013_245G1_scaffold_336_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13548..14804
DNA (1257bp) protein (419aa)
argJ; Glutamate N-acetyltransferase / amino-acid N-acetyltransferase (EC:2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDX7_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_336_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14839..15696
DNA (858bp) protein (286aa)
argB; Acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Acetylglutamate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5I3_9FIRM
L2_013_245G1_scaffold_336_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15729..16913
DNA (1185bp) protein (395aa)
argD; Acetylornithine/N-succinyldiaminopimelate aminotransferase (EC:2.6.1.17)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Acetylornithine aminotransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY08_9FIRM
L2_013_245G1_scaffold_336_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16992..17906
DNA (915bp) protein (305aa)
argF; Ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Ornithine carbamoyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T8L1_9FIRM
L2_013_245G1_scaffold_336_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18027..18248)
DNA (222bp) protein (74aa)
Predicted transcriptional regulator n=3 Tax=Eubacterium RepID=D4JUI0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05477.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_336_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18254..18400)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1H8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66045.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_336_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18348..18860)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66046.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_336_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18887..21346)
DNA (2460bp) protein (820aa)
Cellobiose phosphorylase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5I5_9FIRM
Glycoside Hydrolase Family 94 protein {ECO:0000313|EMBL:CCO05478.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Glycoside Hydrolase Family 94 protein
L2_013_245G1_scaffold_336_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21519..22547)
DNA (1029bp) protein (343aa)
Aldose 1-epimerase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY13_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:CDC66048.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_245G1_scaffold_336_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22798..23004
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T8L5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05480.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_336_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23596..24126
DNA (531bp) protein (177aa)
Isochorismatase hydrolase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1I2_9FIRM
Isochorismatase hydrolase {ECO:0000313|EMBL:CDC66050.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_245G1_scaffold_336_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24161..24871
DNA (711bp) protein (237aa)
Branched-chain amino acid transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDY7_9FIRM
azlC; branched-chain amino acid transport protein AzlC
Branched-chain amino acid transport protein AzlC {ECO:0000313|EMBL:CCO05482.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_336_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24865..25185
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5I9_9FIRM
azlD; branched-chain amino acid transport protein AzlD
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:CCO05483.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_336_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25442..26275)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66053.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_245G1_scaffold_336_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26440..29151
DNA (2712bp) protein (904aa)
Cation-transporting ATPase (EC:3.6.3.-)
Cation-transporting ATPase {ECO:0000313|EMBL:CCO05486.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05486.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative calcium-translocating P-type ATPase PMCA-type n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T8M0_9FIRM
L2_013_245G1_scaffold_336_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29184..29870)
DNA (687bp) protein (229aa)
Putative lipoprotein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1I6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05487.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 1-30 of 39 in total

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