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L2_013_245G1_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_358_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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354..2612
DNA (2259bp) protein (753aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CCO05132.1}; EC=1.17.4.2 {ECO:0000313|EMBL:CCO05132.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCN0_9FIRM
L2_013_245G1_scaffold_358_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2615..3130
DNA (516bp) protein (172aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1Z8_9FIRM
L2_013_245G1_scaffold_358_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3204..4664)
DNA (1461bp) protein (487aa)
Band 7 protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U9I7_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05130.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4761..5429)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6THX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67456.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_245G1_scaffold_358_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5646..6182
DNA (537bp) protein (179aa)
Helix-turn-helix domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5E5_9FIRM
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDC67455.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_013_245G1_scaffold_358_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6192..6641
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67454.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_245G1_scaffold_358_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6773..6877
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1Z0_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04946.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7005..7643)
DNA (639bp) protein (213aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter ATPase component {ECO:0000313|EMBL:CCO05126.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO05126.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Bacitracin ABC transporter, ATP-binding protein BcrA family protein n=1 Tax=Ruminococcus albus 8 RepID=E9SCN7_RUMAL
L2_013_245G1_scaffold_358_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7660..8535)
DNA (876bp) protein (292aa)
Putative membrane protein n=1 Tax=Ruminococcus albus 8 RepID=E9SCN6_RUMAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05125.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8543..9415)
DNA (873bp) protein (291aa)
Putative membrane protein n=1 Tax=Ruminococcus albus 8 RepID=E9SCN5_RUMAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05124.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9412..10470)
DNA (1059bp) protein (353aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05123.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10460..11608)
DNA (1149bp) protein (383aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05122.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11630..12040)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAL2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05121.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12448..13224
DNA (777bp) protein (259aa)
thyX; FAD-dependent thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408, ECO:0000313|EMBL:CCO05119.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Thymidylate synthase ThyX n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBG7_9FIRM
L2_013_245G1_scaffold_358_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13214..13882
DNA (669bp) protein (223aa)
putative thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0S8_9FIRM
Thymidylate kinase {ECO:0000313|EMBL:CDC67013.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_358_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13893..14798
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8D4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05117.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14818..15360
DNA (543bp) protein (181aa)
hypothetical protein (EC:3.2.-.-)
DJ-1 family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGP4_9FIRM
DJ-1 family protein {ECO:0000313|EMBL:CDC67011.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_358_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15357..15932
DNA (576bp) protein (192aa)
5-formyltetrahydrofolate cyclo-ligase ; AltName: Full=5,10-methenyl-tetrahydrofolate synthetase; Short=Methenyl-THF synthetase; Short=MTHFS (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CCO05115.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4B8_9FIRM
L2_013_245G1_scaffold_358_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15936..17342
DNA (1407bp) protein (469aa)
YceG family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBG0_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05114.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17361..18584
DNA (1224bp) protein (408aa)
putative protease (EC:3.4.-.-)
Peptidase U32 family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0S0_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CDC67008.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_358_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18622..19602)
DNA (981bp) protein (327aa)
Tyrosine recombinase XerC n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8C9_9FIRM
Tyrosine recombinase XerC {ECO:0000313|EMBL:CDC67007.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_013_245G1_scaffold_358_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20016..20117
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67006.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_013_245G1_scaffold_358_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20117..20791
DNA (675bp) protein (225aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ung; uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4B2_9FIRM
L2_013_245G1_scaffold_358_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20836..23130)
DNA (2295bp) protein (765aa)
Putative membrane protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO05110.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein
L2_013_245G1_scaffold_358_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23151..23924)
DNA (774bp) protein (258aa)
trmH2; RNA methyltransferase, TrmH family (EC:2.1.1.-)
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:CCO05109.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCO05109.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
RNA methyltransferase TrmH family group 3 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0R5_9FIRM
L2_013_245G1_scaffold_358_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24057..24317)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8C7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05108.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24850..25533)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGN7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05107.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25662..26465
DNA (804bp) protein (268aa)
8-oxoguanine DNA-glycosylase (Ogg) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T497_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05106.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_013_245G1_scaffold_358_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26513..28201)
DNA (1689bp) protein (563aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123, ECO:0000313|EMBL:CCO05105.1};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Arginine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBE5_9FIRM
L2_013_245G1_scaffold_358_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28229..28666)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66998.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
Displaying items 1-30 of 42 in total

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