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L2_013_245G1_scaffold_370

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_370_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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425..1012
DNA (588bp) protein (196aa)
DNA-binding helix-turn-helix protein n=2 Tax=Firmicutes RepID=F9NGM9_STREQ
Uncharacterized protein {ECO:0000313|EMBL:EGX71648.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
DNA-binding protein
L2_013_245G1_scaffold_370_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1028..1144
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=2 Tax=Firmicutes RepID=F9NGN0_STREQ
Uncharacterized protein {ECO:0000313|EMBL:EGX71647.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_013_245G1_scaffold_370_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1498..2322
DNA (825bp) protein (275aa)
Predicted transcriptional regulators n=1 Tax=Clostridium nexile CAG:348 RepID=R6QLL5_9CLOT
Predicted transcriptional regulators {ECO:0000313|EMBL:CDC22862.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted transcriptional regulators
L2_013_245G1_scaffold_370_4
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2369..3322
DNA (954bp) protein (318aa)
MATE efflux family protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PCC0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDC21160.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
putative efflux protein, MATE family
L2_013_245G1_scaffold_370_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3818..5194)
DNA (1377bp) protein (459aa)
MATE efflux family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B264_RUMGN
MATE efflux family protein {ECO:0000313|EMBL:EDN78336.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Na+-driven multidrug efflux pump
L2_013_245G1_scaffold_370_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5407..5892)
DNA (486bp) protein (162aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BXV1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46939.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_013_245G1_scaffold_370_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6211..7173
DNA (963bp) protein (321aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Lachnospiraceae RepID=F7JYC7_9FIRM
L2_013_245G1_scaffold_370_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7191..7415
DNA (225bp) protein (75aa)
Acyl carrier protein n=4 Tax=Clostridiales RepID=A7B269_RUMGN
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acyl carrier protein
L2_013_245G1_scaffold_370_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7432..8370
DNA (939bp) protein (313aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Enoyl-(Acyl-carrier-protein) reductase II n=4 Tax=Clostridiales RepID=F7JYG7_9FIRM
Enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:CCZ68435.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_370_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8363..9283
DNA (921bp) protein (307aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Clostridiales RepID=A7B271_RUMGN
L2_013_245G1_scaffold_370_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9277..10017
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=3 Tax=Clostridiales RepID=F7JYG6_9FIRM
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ETD19316.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_013_245G1_scaffold_370_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10032..11270
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Clostridiales RepID=A7B273_RUMGN
L2_013_245G1_scaffold_370_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11281..11706
DNA (426bp) protein (142aa)
Acetyl-CoA carboxylase n=4 Tax=Clostridiales RepID=F7JYG5_9FIRM
Putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit {ECO:0000313|EMBL:EDN78346.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L2_013_245G1_scaffold_370_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11720..12151
DNA (432bp) protein (144aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=4 Tax=Clostridiales RepID=A7B275_RUMGN
L2_013_245G1_scaffold_370_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12154..13497
DNA (1344bp) protein (448aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Biotin carboxylase n=4 Tax=Clostridiales RepID=A7B276_RUMGN
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EGN46925.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_013_245G1_scaffold_370_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13513..15201
DNA (1689bp) protein (563aa)
Acetyl-CoA carboxylase {ECO:0000256|SAAS:SAAS00057486}; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UI23_9FIRM
L2_013_245G1_scaffold_370_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15234..16286
DNA (1053bp) protein (351aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B278_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46923.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Dioxygenases related to 2-nitropropane dioxygenase
L2_013_245G1_scaffold_370_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16329..16790
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B279_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68444.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transcriptional regulator, MarR family
L2_013_245G1_scaffold_370_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16829..17479
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TRU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68445.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_013_245G1_scaffold_370_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17755..18642
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5UBB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68446.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_013_245G1_scaffold_370_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18668..19693)
DNA (1026bp) protein (342aa)
Transcriptional regulators (EC:5.1.1.1)
Putative DNA-binding transcriptional regulator CytR n=2 Tax=Clostridiales RepID=A7B284_RUMGN
Putative DNA-binding transcriptional regulator CytR {ECO:0000313|EMBL:CCZ68447.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_370_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19872..19982
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68448.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_245G1_scaffold_370_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20005..20205
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68449.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
pullulanase, type I
L2_013_245G1_scaffold_370_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20212..22155
DNA (1944bp) protein (648aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BXS7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46913.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glycogen debranching protein
L2_013_245G1_scaffold_370_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22183..24444
DNA (2262bp) protein (754aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Phosphorylase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UBB7_9FIRM
glycogen/starch/alpha-glucan phosphorylase
L2_013_245G1_scaffold_370_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24475..25944
DNA (1470bp) protein (490aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UI34_9FIRM
L2_013_245G1_scaffold_370_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25957..27711
DNA (1755bp) protein (585aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B294_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46909.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glycosidase
L2_013_245G1_scaffold_370_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27724..29352
DNA (1629bp) protein (543aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B295_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46908.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glucan 1,6-alpha-glucosidase
L2_013_245G1_scaffold_370_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29519..30865
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BWY6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19295.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
MATE family multidrug resistance protein
L2_013_245G1_scaffold_370_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31143..32450
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BVZ1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19294.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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