ggKbase home page

L2_013_245G1_scaffold_459

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_459_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..672
DNA (672bp) protein (224aa)
Glycerate kinase {ECO:0000313|EMBL:EIH13666.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EIH13666.1};; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
Glycerate kinase II n=21 Tax=Escherichia coli RepID=C8U2J5_ECO10
glxK; glycerate kinase II
L2_013_245G1_scaffold_459_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(802..1587)
DNA (786bp) protein (262aa)
Uncharacterized protein n=354 Tax=Escherichia coli RepID=B6I0G5_ECOSE
ylbA; hypothetical protein
Ureidoglycine aminohydrolase {ECO:0000313|EMBL:CDL28258.1}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
L2_013_245G1_scaffold_459_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1598..2833)
DNA (1236bp) protein (412aa)
allC; allantoate amidohydrolase (EC:3.5.3.-)
Allantoate amidohydrolase n=5 Tax=Escherichia coli RepID=F7MTY1_ECOLX
Allantoate amidohydrolase {ECO:0000313|EMBL:EGP26179.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
L2_013_245G1_scaffold_459_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2855..3904)
DNA (1050bp) protein (350aa)
Ureidoglycolate dehydrogenase n=30 Tax=Escherichia coli RepID=E3PGE9_ECOH1
ureidoglycolate dehydrogenase
Ureidoglycolate dehydrogenase {ECO:0000313|EMBL:EFF14330.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
L2_013_245G1_scaffold_459_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4221..5888
DNA (1668bp) protein (556aa)
Protein fdrA n=6 Tax=Escherichia coli RepID=L3EMI6_ECOLX
Membrane protein FdrA {ECO:0000313|EMBL:EIH13290.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
fdrA; membrane protein FdrA
L2_013_245G1_scaffold_459_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5898..7157
DNA (1260bp) protein (420aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=L3EN47_ECOLX
PF06545 family protein {ECO:0000313|EMBL:EIH13362.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
ylbE; hypothetical protein
L2_013_245G1_scaffold_459_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7168..7935
DNA (768bp) protein (256aa)
Carboxylase n=5 Tax=Escherichia coli RepID=L3EPH1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EGP26065.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
hypothetical protein
L2_013_245G1_scaffold_459_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7883..8776
DNA (894bp) protein (298aa)
Carbamate kinase n=6 Tax=Escherichia coli RepID=F7MTY7_ECOLX
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
ybcF; carbamate kinase
L2_013_245G1_scaffold_459_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8896..9963)
DNA (1068bp) protein (356aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
purK; phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide synthase n=5 Tax=Escherichia coli RepID=F7MTY8_ECOLX
L2_013_245G1_scaffold_459_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9960..10469)
DNA (510bp) protein (170aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1039 Tax=root RepID=PURE_ECO57
L2_013_245G1_scaffold_459_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10586..11308)
DNA (723bp) protein (241aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
UDP-2,3-diacylglucosamine hydrolase n=5 Tax=Escherichia coli RepID=F7MTZ0_ECOLX
lpxH; UDP-2,3-diacylglucosamine hydrolase
L2_013_245G1_scaffold_459_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11311..11805)
DNA (495bp) protein (165aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Peptidyl-prolyl cis-trans isomerase n=148 Tax=Escherichia RepID=B7ME48_ECO45
peptidyl-prolyl cis-trans isomerase B
L2_013_245G1_scaffold_459_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11979..13364
DNA (1386bp) protein (462aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
Cysteine--tRNA ligase n=785 Tax=Enterobacteriaceae RepID=SYC_ECO24
L2_013_245G1_scaffold_459_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13400..13921)
DNA (522bp) protein (174aa)
Inner membrane protein ybcI n=3 Tax=Escherichia coli RepID=F7MTZ3_ECOLX
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EIH13519.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
putative membrane-bound metal-dependent hydrolase
L2_013_245G1_scaffold_459_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14029..14241)
DNA (213bp) protein (71aa)
Uncharacterized protein n=29 Tax=Enterobacteriaceae RepID=I0VAB1_SHIFL
hypothetical protein
Ribosome-associated protein {ECO:0000313|EMBL:EOW09960.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L2_013_245G1_scaffold_459_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14243..15109)
DNA (867bp) protein (289aa)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=140 Tax=Enterobacteriaceae RepID=FOLD_ECO7I
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L2_013_245G1_scaffold_459_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15580..16122
DNA (543bp) protein (181aa)
Sfm fimbrial protein, A chain n=881 Tax=Enterobacteriaceae RepID=SFMA_ECO57
type-1 fimbrial protein subunit A
Type-1 fimbrial protein, A chain {ECO:0000313|EMBL:KDY13932.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
L2_013_245G1_scaffold_459_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16342..17034
DNA (693bp) protein (231aa)
Chaperone protein FimC homolog n=22 Tax=Escherichia coli RepID=B1LKF0_ECOSM
chaperone protein FimC-like protein
Chaperone sfmC {ECO:0000313|EMBL:EOU95693.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L2_013_245G1_scaffold_459_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17065..19674
DNA (2610bp) protein (870aa)
Outer membrane usher protein SfmD n=21 Tax=Escherichia coli RepID=D6J7N2_ECOLX
Outer membrane usher protein sfmD {ECO:0000313|EMBL:EQX77461.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
sfmD; putative outer membrane export usher protein
L2_013_245G1_scaffold_459_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19687..20694
DNA (1008bp) protein (336aa)
Mannose binding protein FimH homolog n=96 Tax=Escherichia coli RepID=B1LKF2_ECOSM
mannose binding protein FimH-like protein
Protein sfmH {ECO:0000313|EMBL:ESK42214.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L2_013_245G1_scaffold_459_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20705..21220
DNA (516bp) protein (172aa)
Fimbrial-like protein sfmF n=3 Tax=Escherichia coli RepID=L3EN62_ECOLX
sfmF; fimbrial protein
Fimbrial-like protein sfmF {ECO:0000313|EMBL:ETY49947.1}; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
L2_013_245G1_scaffold_459_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21223..21855)
DNA (633bp) protein (211aa)
Fimbriae Z protein n=595 Tax=Enterobacteriaceae RepID=FIMZ_ECO57
transcriptional regulator FimZ
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KDU53513.1}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C1.;"
L2_013_245G1_scaffold_459_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22190..23353)
DNA (1164bp) protein (388aa)
Prophage DLP12 integrase n=95 Tax=Escherichia RepID=D3QKM6_ECOCB
intD; prophage DLP12 integrase
Phage integrase {ECO:0000313|EMBL:EKJ26950.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
L2_013_245G1_scaffold_459_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23552..23830)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L3YMZ4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ28589.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hypothetical protein
L2_013_245G1_scaffold_459_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23878..24096)
DNA (219bp) protein (73aa)
Predicted C4-type zinc finger protein n=35 Tax=Escherichia coli RepID=C8TJC5_ECO26
C4-type zinc finger protein
Putative C4-type zinc finger protein {ECO:0000313|EMBL:EIL51772.1}; TaxID=752785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 541-15.;"
L2_013_245G1_scaffold_459_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24195..24410)
DNA (216bp) protein (72aa)
Uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=B7M6E8_ECO8A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDG99996.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L2_013_245G1_scaffold_459_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24487..25044)
DNA (558bp) protein (186aa)
DNA N-6-adenine-methyltransferase from phage origin (EC:2.1.1.72)
Phage N-6-adenine-methyltransferase n=58 Tax=Escherichia coli RepID=B3IGE6_ECOLX
Strain O157 SvETEC scaffold83.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ43805.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_013_245G1_scaffold_459_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25037..25198)
DNA (162bp) protein (54aa)
Uncharacterized protein n=12 Tax=Escherichia coli RepID=B3IGE5_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EFF06827.2}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
hypothetical protein
L2_013_245G1_scaffold_459_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25195..25875)
DNA (681bp) protein (227aa)
exo; exonuclease (EC:3.1.11.3)
Exonuclease n=71 Tax=Escherichia RepID=A7ZJF2_ECO24
Chromosome, complete genome {ECO:0000313|EMBL:CAU96628.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L2_013_245G1_scaffold_459_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25872..26657)
DNA (786bp) protein (262aa)
Phage recombination protein Bet n=3 Tax=Escherichia coli RepID=L3YKM6_ECOLX
Phage recombination protein Bet {ECO:0000313|EMBL:EIH13516.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
Recombination protein bet from phage origin
Displaying items 1-30 of 50 in total

View Taxonomy