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L2_013_245G1_scaffold_462

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_462_1
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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120..251
DNA (132bp) protein (44aa)
Conjugative tansposon protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VHU1_9FIRM
Conjugative tansposon protein {ECO:0000313|EMBL:EFV17566.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
putative conjugative transposon proteinTn916-like, CTn1-Orf23
L2_013_245G1_scaffold_462_2
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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263..1099
DNA (837bp) protein (279aa)
Putative cell wall hydrolase Tn916-like,CTn7-Orf16 n=2 Tax=Clostridium difficile RepID=U3W8E1_CLODI
NlpC/P60 family protein {ECO:0000313|EMBL:EFP62601.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
putative cell wall hydrolaseTn916-like,CTn7-Orf16
L2_013_245G1_scaffold_462_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1118..2014
DNA (897bp) protein (299aa)
Uncharacterized protein n=18 Tax=Firmicutes RepID=D5Q4R3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFH07119.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
putative conjugative transposon proteinTn916-like, CTn1-Orf16
L2_013_245G1_scaffold_462_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2174..2407
DNA (234bp) protein (78aa)
Transcriptional regulator, AbrB family domain protein n=3 Tax=Clostridium difficile RepID=T3WK84_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL32014.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
AbrB family transcriptional regulator
L2_013_245G1_scaffold_462_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2397..3014
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium difficile DA00246 RepID=T3WF00_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF26732.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L2_013_245G1_scaffold_462_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3034..3270
DNA (237bp) protein (79aa)
Putative conjugative transposon protein Tn916-like, CTn1-Orf14 n=3 Tax=Clostridium difficile RepID=U3WQ32_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EDQ96692.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
conjugative transposon protein
L2_013_245G1_scaffold_462_7
unknown

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3267..3362
DNA (96bp) protein (32aa)
Putative transcriptional regulator n=2 Tax=Clostridium difficile RepID=U3W8D6_CLODI
L2_013_245G1_scaffold_462_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3509..4117
DNA (609bp) protein (203aa)
Putative transcriptional regulator n=2 Tax=Clostridium difficile RepID=U3W8D6_CLODI
hypothetical protein
Putative transcriptional regulator {ECO:0000313|EMBL:EPS51468.1}; TaxID=1302425 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN002367.;"
L2_013_245G1_scaffold_462_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4188..4802
DNA (615bp) protein (205aa)
Putative protease YdeA {ECO:0000313|EMBL:CEE96248.1}; EC=3.2.-.- {ECO:0000313|EMBL:CEE96248.1};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
DJ-1/PfpI family protein n=6 Tax=Clostridium difficile RepID=T3WCJ8_CLODI
ThiJ/PfpI domain-containing protein
L2_013_245G1_scaffold_462_10
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(5227..5478)
DNA (252bp) protein (84aa)
Helix-turn-helix family protein n=6 Tax=Clostridium difficile RepID=T3WKB7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EOH80797.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 43197.;"
XRE family transcriptional regulator
L2_013_245G1_scaffold_462_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5745..6446
DNA (702bp) protein (234aa)
Lantibiotic transport ATP-binding protein srtF n=5 Tax=Clostridium difficile RepID=U3W610_CLODI
Lantibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY30454.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC transporter
L2_013_245G1_scaffold_462_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6448..7191
DNA (744bp) protein (248aa)
Lantibiotic protection ABC transporter permease subunit, MutE/EpiE family protein n=6 Tax=Clostridium difficile RepID=T3WCR8_CLODI
Bacteriocin ABC transporter permease {ECO:0000313|EMBL:KEY30453.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
bacteriocin ABC transporter, permease protein subunit
L2_013_245G1_scaffold_462_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7191..7934
DNA (744bp) protein (248aa)
Lantibiotic protection ABC transporter permease subunit, MutG family protein n=6 Tax=Clostridium difficile RepID=T3WGG7_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52097.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_013_245G1_scaffold_462_14
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7927..8736
DNA (810bp) protein (270aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T3WEZ2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EOS23889.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L2_013_245G1_scaffold_462_15
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8733..9458
DNA (726bp) protein (242aa)
Transcriptional regulatory protein spaR n=6 Tax=Clostridium difficile RepID=U3W5U4_CLODI
Subtilin biosynthesis regulatory protein SpaR {ECO:0000313|EMBL:KIC05583.1}; TaxID=1402208 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis DPC 6832.;"
two-component response regulator
L2_013_245G1_scaffold_462_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9449..10813
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Integral membrane sensor signal transduction histidine kinase n=5 Tax=Clostridium difficile RepID=U3W607_CLODI
integral membrane sensor signal transduction histidine kinase
L2_013_245G1_scaffold_462_17
Streptococcus infantarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10978..11238
DNA (261bp) protein (87aa)
Lantibiotic biosynthesis DNA-binding response regulator n=2 Tax=Streptococcus infantarius subsp. infantarius RepID=H6P9W4_STRIC
lantibiotic biosynthesis DNA-binding response regulator
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDT47506.1}; TaxID=471872 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus infantarius subsp. infantarius ATCC BAA-102.;"
L2_013_245G1_scaffold_462_18
Streptococcus lutetiensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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11231..12568
DNA (1338bp) protein (446aa)
Lantibiotic biosynthesis sensor protein n=1 Tax=Streptococcus lutetiensis 033 RepID=S5RL13_9STRE
lantibiotic biosynthesis sensor protein
Lantibiotic biosynthesis sensor protein {ECO:0000313|EMBL:AGS05518.1}; TaxID=1076934 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus lutetiensis 033.;"
L2_013_245G1_scaffold_462_19
Streptococcus lutetiensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12861..13178
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Streptococcus lutetiensis 033 RepID=S5QX71_9STRE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS05517.1}; TaxID=1076934 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus lutetiensis 033.;"
L2_013_245G1_scaffold_462_20
Streptococcus equinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13397..13804)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Streptococcus lutetiensis 033 RepID=S5R4H3_9STRE
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KFN87733.1}; TaxID=1294274 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equinus JB1.;"
L2_013_245G1_scaffold_462_21
Streptococcus lutetiensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13994..14848
DNA (855bp) protein (285aa)
Ribosome biogenesis GTPase A n=1 Tax=Streptococcus lutetiensis 033 RepID=S5R068_9STRE
ribosomal biogenesis GTPase
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1076934 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus lutetiensis 033.;"
L2_013_245G1_scaffold_462_22
Streptococcus lutetiensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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14835..15614
DNA (780bp) protein (260aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1076934 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus lutetiensis 033.;"
Ribonuclease HII n=1 Tax=Streptococcus lutetiensis 033 RepID=S5RL09_9STRE
ribonuclease HII
L2_013_245G1_scaffold_462_23
Streptococcus lutetiensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15615..16166
DNA (552bp) protein (184aa)
Maltose O-acetyltransferase n=1 Tax=Streptococcus lutetiensis 033 RepID=S5QX68_9STRE
maltose O-acetyltransferase
Maltose O-acetyltransferase {ECO:0000313|EMBL:AGS05512.1}; TaxID=1076934 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus lutetiensis 033.;"
L2_013_245G1_scaffold_462_24
Streptococcus lutetiensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16238..17080
DNA (843bp) protein (281aa)
Smf family DNA processing protein n=1 Tax=Streptococcus lutetiensis 033 RepID=S5RI80_9STRE
smf family DNA processing protein
Smf family DNA processing protein {ECO:0000313|EMBL:AGS05511.1}; TaxID=1076934 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus lutetiensis 033.;"
L2_013_245G1_scaffold_462_25
Streptococcus lutetiensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17055..19313
DNA (2259bp) protein (753aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1076934 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus lutetiensis 033.;"
DNA topoisomerase 1 n=1 Tax=Streptococcus lutetiensis 033 RepID=S5QX37_9STRE
DNA topoisomerase I
L2_013_245G1_scaffold_462_26
Streptococcus lutetiensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19458..20123
DNA (666bp) protein (222aa)
Secretion and acid tolerance protein SatD n=1 Tax=Streptococcus lutetiensis 033 RepID=S5RI28_9STRE
secretion and acid tolerance protein SatD
Secretion and acid tolerance protein SatD {ECO:0000313|EMBL:AGS05456.1}; TaxID=1076934 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus lutetiensis 033.;"
L2_013_245G1_scaffold_462_27
Streptococcus equinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20123..20215
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Streptococcus equinus ATCC 9812 RepID=E8JN91_STREI
Uncharacterized protein {ECO:0000313|EMBL:EFW89358.1}; TaxID=525379 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equinus ATCC 9812.;"
satE; secretion and acid tolerance protein
L2_013_245G1_scaffold_462_28
Streptococcus lutetiensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20225..20845
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Streptococcus lutetiensis 033 RepID=S5R4B2_9STRE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS05455.1}; TaxID=1076934 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus lutetiensis 033.;"
L2_013_245G1_scaffold_462_29
Streptococcus equinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21044..22381
DNA (1338bp) protein (446aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=525379 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equinus ATCC 9812.;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Streptococcus equinus ATCC 9812 RepID=E8JN89_STREI
gid; glucose-inhibited division protein
L2_013_245G1_scaffold_462_30
Streptococcus lutetiensis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22410..23231
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Streptococcus lutetiensis 033 RepID=S5RKV9_9STRE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS05453.1}; TaxID=1076934 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus lutetiensis 033.;"
Displaying items 1-30 of 44 in total

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