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L2_013_245G1_scaffold_149

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_149_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..122)
DNA (120bp) protein (40aa)
Transposase domain containing protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M316_BIFBI
transposase
Uncharacterized protein {ECO:0000313|EMBL:EPD74784.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_013_245G1_scaffold_149_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

236..451
DNA (216bp) protein (72aa)
Transposase n=3 Tax=Bifidobacterium longum subsp. longum RepID=D6ZYA9_BIFLJ
Transposase
Transposase {ECO:0000313|EMBL:AHJ20151.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_013_245G1_scaffold_149_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(539..646)
DNA (108bp) protein (36aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum RepID=I3ASH0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ30924.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_013_245G1_scaffold_149_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1056..6950)
DNA (5895bp) protein (1965aa)
Endo-alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:KFI72916.1}; EC=3.2.1.97 {ECO:0000313|EMBL:KFI72916.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Endo-alpha-N-acetylgalactosaminidase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B3L9_BIFLN
endo-alpha-N-acetylgalactosaminidase
L2_013_245G1_scaffold_149_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7385..7873)
DNA (489bp) protein (163aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum subsp. longum RepID=I3ASG7_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI72917.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_013_245G1_scaffold_149_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8414..9934)
DNA (1521bp) protein (507aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Glutamate--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXM0_BIFLJ
glutamyl-tRNA synthetase
L2_013_245G1_scaffold_149_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10239..11510
DNA (1272bp) protein (424aa)
Integral membrane protein n=2 Tax=Bifidobacterium longum RepID=S3DPX5_BIFLN
Membrane protein {ECO:0000313|EMBL:KFI72923.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_013_245G1_scaffold_149_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11741..12610)
DNA (870bp) protein (290aa)
Aldose 1-epimerase {ECO:0000313|EMBL:KFI72924.1}; EC=5.1.3.15 {ECO:0000313|EMBL:KFI72924.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Aldose 1-epimerase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT94_BIFLS
aldose 1-epimerase
L2_013_245G1_scaffold_149_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12893..13075)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6H4_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26434.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_013_245G1_scaffold_149_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13487..14221
DNA (735bp) protein (245aa)
Transcriptional regulator, DeoR family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CBL2_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32343.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Transcriptional regulator, DeoR family
L2_013_245G1_scaffold_149_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14334..15260)
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CCG8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:KFI72927.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Hypothetical protein
L2_013_245G1_scaffold_149_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15348..16007)
DNA (660bp) protein (220aa)
Phosphoglycerate mutase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXL1_BIFLJ
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ADG99657.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_245G1_scaffold_149_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16247..17698
DNA (1452bp) protein (484aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXL0_BIFLJ
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:KFI72929.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_013_245G1_scaffold_149_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17747..18283)
DNA (537bp) protein (179aa)
GtrA-like protein n=5 Tax=Bifidobacterium RepID=I3B3M2_BIFLN
hypothetical protein
GtrA-like protein {ECO:0000313|EMBL:EIJ30939.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_013_245G1_scaffold_149_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18484..18831
DNA (348bp) protein (116aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=B7GT88_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY26900.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_013_245G1_scaffold_149_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19226..20743)
DNA (1518bp) protein (506aa)
Formyltetrahydrofolate synthetase n=9 Tax=Bifidobacterium RepID=B3DU97_BIFLD
formate-tetrahydrofolate ligase
Formyltetrahydrofolate synthetase {ECO:0000313|EMBL:ACD98716.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_013_245G1_scaffold_149_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20902..22503)
DNA (1602bp) protein (534aa)
Dipeptidase n=12 Tax=Bifidobacterium RepID=PEPD_BIFLO
Dipeptidase {ECO:0000313|EMBL:ACD98717.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
dipeptidase
L2_013_245G1_scaffold_149_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22765..23319)
DNA (555bp) protein (185aa)
Uncharacterized protein yxkA n=2 Tax=Bifidobacterium longum subsp. longum RepID=T2HYY8_BIFLN
Raf
Uncharacterized protein yxkA {ECO:0000313|EMBL:CCK34117.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L2_013_245G1_scaffold_149_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23436..24587)
DNA (1152bp) protein (384aa)
AAA ATPase {ECO:0000313|EMBL:KFI72935.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KFI72935.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
AAA ATPase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXK4_BIFLJ
AAA ATPase
L2_013_245G1_scaffold_149_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24584..25285)
DNA (702bp) protein (234aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
dTMP kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=KTHY_BIFLS
L2_013_245G1_scaffold_149_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25563..28649)
DNA (3087bp) protein (1029aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
DNA topoisomerase 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXK2_BIFLJ
DNA topoisomerase I
L2_013_245G1_scaffold_149_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28773..29738)
DNA (966bp) protein (322aa)
Phosphoesterase, PA-phosphatase related protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXK1_BIFLJ
phosphoesterase, PA-phosphatase related protein
Phosphoesterase, PA-phosphatase related protein {ECO:0000313|EMBL:KFI72938.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_013_245G1_scaffold_149_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30301..32715
DNA (2415bp) protein (805aa)
Family 51 glycosyl transferase {ECO:0000313|EMBL:KFI72939.1}; EC=2.4.1.129 {ECO:0000313|EMBL:KFI72939.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Glycosyl transferase, family 51 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXK0_BIFLJ
family 51 glycosyl transferase
L2_013_245G1_scaffold_149_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32783..34699)
DNA (1917bp) protein (639aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
2-isopropylmalate synthase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXJ9_BIFLJ
2-isopropylmalate synthase
L2_013_245G1_scaffold_149_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35388..36968
DNA (1581bp) protein (527aa)
Metallophosphoesterase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT74_BIFLS
Metallophosphatase {ECO:0000313|EMBL:KEY26913.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
metallophosphoesterase
L2_013_245G1_scaffold_149_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36971..37591)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=D6ZXJ7_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP82806.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_013_245G1_scaffold_149_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37760..38854
DNA (1095bp) protein (365aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ACJ51295.1}; EC=1.2.1.11 {ECO:0000313|EMBL:ACJ51295.1};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Aspartate-semialdehyde dehydrogenase n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MNF8_BIFLS
L2_013_245G1_scaffold_149_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38935..39501)
DNA (567bp) protein (189aa)
Aspartokinase {ECO:0000313|EMBL:CEF07400.1}; EC=2.7.2.4 {ECO:0000313|EMBL:CEF07400.1};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Amino acid-binding ACT domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT71_BIFLS
amino acid-binding ACT protein
L2_013_245G1_scaffold_149_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39557..40321)
DNA (765bp) protein (255aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Aspartokinase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXJ4_BIFLJ
aspartate kinase
L2_013_245G1_scaffold_149_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40913..41332
DNA (420bp) protein (140aa)
Sortase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B3M8_BIFLN
LPXTG-site transpeptidase (sortase) family protein
Sortase {ECO:0000313|EMBL:KEY31893.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Displaying items 1-30 of 57 in total

View Taxonomy