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L2_013_245G1_scaffold_1037

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_1037_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(91..198)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32818.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_013_245G1_scaffold_1037_2
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(195..749)
DNA (555bp) protein (185aa)
Hydrolase NUDIX family n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5W8D5_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ91996.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
Isopentenyldiphosphate isomerase
L2_013_245G1_scaffold_1037_3
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(920..1912)
DNA (993bp) protein (331aa)
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase n=1 Tax=Clostridium sp. CAG:411 RepID=R7HXL7_9CLOT
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase {ECO:0000313|EMBL:CDE44439.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
hypothetical protein
L2_013_245G1_scaffold_1037_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1952..3343)
DNA (1392bp) protein (464aa)
Transporter n=2 Tax=Dorea RepID=A6BGM1_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
sodium:neurotransmitter symporter family protein
L2_013_245G1_scaffold_1037_5
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3529..4404
DNA (876bp) protein (292aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBB2_9CLOT
LysR family transcriptional regulator {ECO:0000313|EMBL:KGK88597.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
Transcriptional regulator
L2_013_245G1_scaffold_1037_6
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(4502..4681)
DNA (180bp) protein (60aa)
ATP-binding cassette subfamily B bacterial n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I5G0_9FIRM
ATP-binding cassette subfamily B bacterial {ECO:0000313|EMBL:CDB44510.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
ABC transporter
L2_013_245G1_scaffold_1037_7
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4684..4974)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI000300D7B7
ATP-binding cassette subfamily B bacterial {ECO:0000313|EMBL:CDB65188.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
ABC transporter
L2_013_245G1_scaffold_1037_8
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4937..5143)
DNA (207bp) protein (69aa)
ATP-binding cassette, subfamily B, bacterial n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z6B3_EUBE2
ATP-binding cassette subfamily B protein
ATP-binding cassette subfamily B bacterial {ECO:0000313|EMBL:CDA39764.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L2_013_245G1_scaffold_1037_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5618..5935)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LQ66_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL22924.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_013_245G1_scaffold_1037_10
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5969..6364)
DNA (396bp) protein (132aa)
ArsC1 n=1 Tax=Eubacterium sp. CAG:156 RepID=R5ZJ66_9FIRM
ArsC1 {ECO:0000313|EMBL:CDA28937.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
arsC1; arsc1
L2_013_245G1_scaffold_1037_11
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6385..7848)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6G6H8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21073.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
hypothetical protein
L2_013_245G1_scaffold_1037_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7934..8317
DNA (384bp) protein (128aa)
Carbon starvation protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X302_9CLOT
Carbon starvation protein {ECO:0000313|EMBL:CDD00872.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
carbon starvation protein CstA
L2_013_245G1_scaffold_1037_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8462..9856)
DNA (1395bp) protein (465aa)
divalent cation transporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FB011E
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Mg2+ transporter (mgtE)
L2_013_245G1_scaffold_1037_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10521..11189
DNA (669bp) protein (223aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF34_9FIRM
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EES76381.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_1037_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11209..12078
DNA (870bp) protein (290aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
serine dehydratase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EF1928
L-serine dehydratase iron-sulfur-dependent alpha subunit {ECO:0000313|EMBL:CDD79589.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_1037_16
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12490..12807
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LYS4_9FIRM
transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CBL22777.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_013_245G1_scaffold_1037_17
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

12804..13388
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XHJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14998.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
hypothetical protein
L2_013_245G1_scaffold_1037_18
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13395..14417
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZSR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87479.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L2_013_245G1_scaffold_1037_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14620..15255)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF36_9FIRM
Integral membrane protein {ECO:0000313|EMBL:CDD79590.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted membrane protein
L2_013_245G1_scaffold_1037_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15495..16682)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CM01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78980.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Major Facilitator Superfamily.
L2_013_245G1_scaffold_1037_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16920..17579)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76392.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Ribonuclease HI
L2_013_245G1_scaffold_1037_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17589..18098)
DNA (510bp) protein (170aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78991.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_1037_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18117..19835)
DNA (1719bp) protein (573aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
acetolactate synthase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031DBECC
L2_013_245G1_scaffold_1037_24
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20370..20540)
DNA (171bp) protein (57aa)
tetracenomycin polyketide synthesis O-methyltransferase TcmP n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DBDAF3
O-methyltransferase domain protein {ECO:0000313|EMBL:EET61803.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
methyltransferase
L2_013_245G1_scaffold_1037_25
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20605..20874)
DNA (270bp) protein (90aa)
tetracenomycin polyketide synthesis O-methyltransferase TcmP n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DBDAF3
O-methyltransferase domain protein {ECO:0000313|EMBL:EET61803.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
methyltransferase
Displaying 25 items

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