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L2_013_245G1_scaffold_1322

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_1322_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..132)
DNA (132bp) protein (44aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M411_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CBL25973.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_013_245G1_scaffold_1322_2
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(455..1804)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WFM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92982.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
hypothetical protein
L2_013_245G1_scaffold_1322_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2195..2455)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17166.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
oxidoreductase
L2_013_245G1_scaffold_1322_4
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2581..3348)
DNA (768bp) protein (256aa)
Cupin domain protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RPC7_9CLOT
Cupin domain protein {ECO:0000313|EMBL:CCZ43090.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
L2_013_245G1_scaffold_1322_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3448..3918)
DNA (471bp) protein (157aa)
Flavodoxin-like protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HST9_9FIRM
Flavodoxin-like protein {ECO:0000313|EMBL:CCY32810.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Flavodoxins
L2_013_245G1_scaffold_1322_6
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4170..5063)
DNA (894bp) protein (298aa)
Transcriptional regulator LysR family n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JJP9_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCY54535.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
Transcriptional regulator
L2_013_245G1_scaffold_1322_7
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5206..5727)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U824_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65157.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L2_013_245G1_scaffold_1322_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5729..6274)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030BC989
Uncharacterized protein {ECO:0000313|EMBL:EES76818.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_1322_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6382..7740)
DNA (1359bp) protein (453aa)
dipeptidase, putative (EC:3.5.1.18)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000305B75C
Uncharacterized protein {ECO:0000313|EMBL:EES76819.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_1322_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7963..8781)
DNA (819bp) protein (273aa)
Acetyl esterase family enzyme n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP80_9FIRM
Acetyl esterase family enzyme {ECO:0000313|EMBL:CDD79731.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
acetyl esterase
L2_013_245G1_scaffold_1322_11
unknown

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comp(8771..8875)
DNA (105bp) protein (35aa)

This feature has no annotations

L2_013_245G1_scaffold_1322_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9278..9937)
DNA (660bp) protein (220aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030EE6B9
Uncharacterized protein {ECO:0000313|EMBL:EES76820.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_1322_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9937..10494)
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76821.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_1322_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10491..11480)
DNA (990bp) protein (330aa)
Inosine-uridine nucleoside N-ribohydrolase (EC:3.2.2.1)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76822.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Displaying 14 items

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