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L2_013_245G1_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_92_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..865
DNA (864bp) protein (288aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHH3_9FIRM
L2_013_245G1_scaffold_92_2
unknown

Not on your lists

907..1038
DNA (132bp) protein (44aa)

This feature has no annotations

L2_013_245G1_scaffold_92_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

993..1622
DNA (630bp) protein (210aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:3.5.4.9 4.3.1.4)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8K0_9FIRM
Methenyl-THF cyclohydrolase {ECO:0000313|EMBL:CDD76877.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_92_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1706..2560
DNA (855bp) protein (285aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J9_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_92_5
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2752..2928
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WZW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFY05325.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L2_013_245G1_scaffold_92_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3142..3897
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78650.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase.
L2_013_245G1_scaffold_92_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4181..5131
DNA (951bp) protein (317aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=2 Tax=Ruminococcus RepID=C6J9D5_9FIRM
L2_013_245G1_scaffold_92_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5521..6315
DNA (795bp) protein (265aa)
Heterodisulfide reductase, subunit B (EC:1.8.98.1)
disulfide reductase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FF7313
Uncharacterized protein {ECO:0000313|EMBL:EES78079.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_92_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6312..6701
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78080.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_92_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6708..8696
DNA (1989bp) protein (663aa)
CoB-CoM heterodisulfide reductase subunit A n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEU1_9FIRM
CoB-CoM heterodisulfide reductase subunit A {ECO:0000313|EMBL:CDD76606.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
FAD dependent oxidoreductase
L2_013_245G1_scaffold_92_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8687..9130
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9D9_9FIRM
Methyl-viologen-reducing hydrogenase delta subunit {ECO:0000313|EMBL:CDD76608.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Coenzyme F420-reducing hydrogenase, delta subunit
L2_013_245G1_scaffold_92_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9118..10092
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78083.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_92_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10096..11127
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78084.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_92_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11127..11981
DNA (855bp) protein (285aa)
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases n=2 Tax=Ruminococcus RepID=R7CH11_9FIRM
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases {ECO:0000313|EMBL:CDD76613.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L2_013_245G1_scaffold_92_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12094..12759
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9E2_9FIRM
Ferredoxin {ECO:0000313|EMBL:CDD76615.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_245G1_scaffold_92_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12775..14385
DNA (1611bp) protein (537aa)
Aspartate oxidase (EC:1.3.99.1 1.4.3.16)
fumarate reductase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000315947E
L-aspartate oxidase {ECO:0000313|EMBL:CDD76623.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_92_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14575..15417
DNA (843bp) protein (281aa)
fumarase alpha subunit (EC:4.2.1.2)
fumarate hydratase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D7342F
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type {ECO:0000313|EMBL:EES78087.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_92_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15419..15985
DNA (567bp) protein (189aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Fumarate hydratase class I n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFW8_9FIRM
Fumarate hydratase class I {ECO:0000313|EMBL:CDD76627.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_92_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16425..17132
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78089.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_92_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17320..18825)
DNA (1506bp) protein (502aa)
Iron only hydrogenase large subunit, C-terminal domain (EC:1.12.7.2)
Iron only hydrogenase large subunit C-terminal domain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKX0_9FIRM
Iron only hydrogenase large subunit C-terminal domain {ECO:0000313|EMBL:CCY97737.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L2_013_245G1_scaffold_92_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19124..19603
DNA (480bp) protein (160aa)
NADH:ubiquinone oxidoreductase 24 kD subunit (EC:1.6.5.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78090.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_92_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19600..21471
DNA (1872bp) protein (624aa)
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit (EC:1.6.5.3)
NADH dehydrogenase I subunit F n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH33_9FIRM
NADH dehydrogenase I subunit F {ECO:0000313|EMBL:CDD76633.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_92_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21487..23175
DNA (1689bp) protein (563aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenase, Fe-only n=2 Tax=Ruminococcus RepID=C6J9E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76635.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_92_24
unknown

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23241..23402
DNA (162bp) protein (54aa)

This feature has no annotations

L2_013_245G1_scaffold_92_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23424..24893
DNA (1470bp) protein (490aa)
Stage IV sporulation protein A n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9F0_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:EES78093.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
stage IV sporulation protein A
L2_013_245G1_scaffold_92_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25073..25456)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76639.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_245G1_scaffold_92_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25596..27092
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFB6_9FIRM
L2_013_245G1_scaffold_92_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27284..28156
DNA (873bp) protein (291aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=2 Tax=Ruminococcus RepID=C6J9F3_9FIRM
L2_013_245G1_scaffold_92_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28455..29429
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78097.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_92_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29473..29730
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030DAC15
Uncharacterized protein {ECO:0000313|EMBL:EES78098.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
iron-only hydrogenase system regulator
Displaying items 1-30 of 142 in total

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