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L2_013_245G1_scaffold_523

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_523_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(377..1396)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JET1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76278.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_523_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1381..3054)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JET3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76280.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Beta-mannanase
L2_013_245G1_scaffold_523_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3234..3329)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JET4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76281.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_523_4
unknown

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comp(3348..3614)
DNA (267bp) protein (89aa)

This feature has no annotations

L2_013_245G1_scaffold_523_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3734..5446
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JET5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76282.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_523_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5527..6702)
DNA (1176bp) protein (392aa)
Surface antigen n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKH9_9FIRM
Surface antigen {ECO:0000313|EMBL:CDD78724.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Fibronectin type III domain.
L2_013_245G1_scaffold_523_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6904..7341)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JET7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76284.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
(R)-hydroxyglutaryl-CoA dehydratase activator
L2_013_245G1_scaffold_523_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7447..8415)
DNA (969bp) protein (323aa)
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC:1.3.1.20)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JET8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76285.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_523_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8538..8735)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77414.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Small, acid-soluble spore proteins, alpha/beta type.
L2_013_245G1_scaffold_523_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8893..9078)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76287.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Putative stress-responsive transcriptional regulator
L2_013_245G1_scaffold_523_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9211..10146)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77416.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF2807).
L2_013_245G1_scaffold_523_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10143..10850)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77417.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF1700).
L2_013_245G1_scaffold_523_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10847..11167)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77418.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, PadR family
L2_013_245G1_scaffold_523_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11399..12802
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76291.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
NOL1/NOP2/sun family putative RNA methylase
L2_013_245G1_scaffold_523_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12857..16666)
DNA (3810bp) protein (1270aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
recombination helicase AddA, Firmicutes type (EC:3.1.11.5)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHH6_9FIRM
L2_013_245G1_scaffold_523_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16668..20054)
DNA (3387bp) protein (1129aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77422.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP-dependent nuclease subunit B
L2_013_245G1_scaffold_523_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20159..20596
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77424.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_245G1_scaffold_523_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20643..22577)
DNA (1935bp) protein (645aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthetase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU8_9FIRM
NAD+ synthetase {ECO:0000313|EMBL:EES76295.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_523_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22636..23514)
DNA (879bp) protein (293aa)
33 kDa chaperonin n=2 Tax=Ruminococcus RepID=C6JEU9_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Disulfide bond chaperones of the HSP33 family
L2_013_245G1_scaffold_523_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23587..24408)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76298.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_013_245G1_scaffold_523_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24580..25728)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77442.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_245G1_scaffold_523_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26113..28275)
DNA (2163bp) protein (721aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV3_9FIRM
L2_013_245G1_scaffold_523_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28471..30309)
DNA (1839bp) protein (613aa)
ABC transporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EE20D3
Uncharacterized protein {ECO:0000313|EMBL:EES76301.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type multidrug transport system, ATPase and permease components
L2_013_245G1_scaffold_523_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30306..32468)
DNA (2163bp) protein (721aa)
ABC transporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003040D7F
Uncharacterized protein {ECO:0000313|EMBL:EES76302.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC transporter ATP-binding protein/permease
L2_013_245G1_scaffold_523_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32605..33078)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E5DB87
Uncharacterized protein {ECO:0000313|EMBL:CDD78659.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
MarR family transcriptional regulator
L2_013_245G1_scaffold_523_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33281..34165)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F960C2
Uncharacterized protein {ECO:0000313|EMBL:EES76304.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulator
L2_013_245G1_scaffold_523_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34338..35672
DNA (1335bp) protein (445aa)
amino acid:sodium symporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030C0F8C
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sodium:neurotransmitter symporter
L2_013_245G1_scaffold_523_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35748..36749)
DNA (1002bp) protein (334aa)
cytidylate kinase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D70BBE
Uncharacterized protein {ECO:0000313|EMBL:EES76306.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_523_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36765..38204)
DNA (1440bp) protein (480aa)
citrate transporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00035F5CFB
Uncharacterized protein {ECO:0000313|EMBL:EES76307.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transporter, UIT6 family (TC 9.B.53)
L2_013_245G1_scaffold_523_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38771..38944)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEW1_9FIRM
Heat-shock protein 101 {ECO:0000313|EMBL:CDD76483.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying items 1-30 of 45 in total

View Taxonomy