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L2_013_245G1_scaffold_612

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_612_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..120
DNA (120bp) protein (40aa)
IS605 OrfB family transposase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JE96_9FIRM
IS605 OrfB family transposase {ECO:0000313|EMBL:EES76517.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transposase, IS605 OrfB family, central region
L2_013_245G1_scaffold_612_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(832..1458)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DD0B26
Uncharacterized protein {ECO:0000313|EMBL:CDD77133.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_245G1_scaffold_612_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1606..2973)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76789.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_612_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3268..4539)
DNA (1272bp) protein (424aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDP1_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_013_245G1_scaffold_612_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4545..5204)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76791.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_013_245G1_scaffold_612_6
Acholeplasma laidlawii, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(5296..5724)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Acholeplasma laidlawii (strain PG-8A) RepID=A9NFR5_ACHLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX81195.1}; TaxID=441768 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma laidlawii (strain PG-8A).;"
L2_013_245G1_scaffold_612_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5721..6920)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76794.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_612_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6904..7470)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77991.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNA polymerase sigma factor, sigma-70 family
L2_013_245G1_scaffold_612_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7919..9451)
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E500E9
Uncharacterized protein {ECO:0000313|EMBL:CDD75844.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Bacterial cell division membrane protein
L2_013_245G1_scaffold_612_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9455..9784)
DNA (330bp) protein (110aa)
PadR family transcriptional regulator n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FD1B05
Uncharacterized protein {ECO:0000313|EMBL:EES76798.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, PadR family
L2_013_245G1_scaffold_612_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9985..10884)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030393C7
Uncharacterized protein {ECO:0000313|EMBL:EES76813.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_612_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10884..11099)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E88007
Uncharacterized protein {ECO:0000313|EMBL:CDD75847.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_245G1_scaffold_612_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11401..12882)
DNA (1482bp) protein (494aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P871_9FIRM
L2_013_245G1_scaffold_612_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12958..14595)
DNA (1638bp) protein (546aa)
Glycosidases (EC:3.2.1.70)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B295_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19297.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_013_245G1_scaffold_612_15
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14668..16422)
DNA (1755bp) protein (585aa)
Putative neopullulanase n=1 Tax=Blautia sp. CAG:37 RepID=R7JYF7_9FIRM
Putative neopullulanase {ECO:0000313|EMBL:CDE67827.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
glycosidase
L2_013_245G1_scaffold_612_16
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16427..18379)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YMX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD63480.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
glycogen debranching protein
L2_013_245G1_scaffold_612_17
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18400..20334)
DNA (1935bp) protein (645aa)
Pullulanase n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3AZK7_9FIRM
Pullulanase {ECO:0000313|EMBL:EGG92194.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
pullulanase, type I
L2_013_245G1_scaffold_612_18
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20343..21215)
DNA (873bp) protein (291aa)
ABC transporter, permease protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GP16_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EJP20128.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_013_245G1_scaffold_612_19
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21218..22591)
DNA (1374bp) protein (458aa)
ABC transporter, permease protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GP91_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EJP20178.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
maltose/maltodextrin transport system permease
L2_013_245G1_scaffold_612_20
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22610..23854)
DNA (1245bp) protein (415aa)
ABC transporter, solute-binding protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LP92_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFU76410.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_013_245G1_scaffold_612_21
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24125..25129
DNA (1005bp) protein (335aa)
Transcriptional regulators (EC:5.1.1.1)
Transcriptional regulator LacI family n=1 Tax=Blautia sp. CAG:37 RepID=R7JW07_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDE67826.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L2_013_245G1_scaffold_612_22
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25227..25394)
DNA (168bp) protein (56aa)
Transcriptional regulator, AraC family n=1 Tax=Coprococcus catus GD/7 RepID=D4JBK3_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDR46762.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Displaying 22 items

View Taxonomy