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L2_013_245G1_scaffold_938

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_938_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..240
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM85853.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Nuclease-related domain.
L2_013_245G1_scaffold_938_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1197..3047
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92697.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_013_245G1_scaffold_938_3
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3294..5951
DNA (2658bp) protein (886aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family n=1 Tax=Blautia sp. KLE 1732 RepID=U2DHQ5_9FIRM
L2_013_245G1_scaffold_938_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6048..6209
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78551.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_938_5
unknown

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6276..6422
DNA (147bp) protein (49aa)

This feature has no annotations

L2_013_245G1_scaffold_938_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6413..8806
DNA (2394bp) protein (798aa)
xylS; alpha-xylosidase (EC:3.2.1.177)
alpha-xylosidase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E78051
Uncharacterized protein {ECO:0000313|EMBL:EES77443.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_938_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9466..11043
DNA (1578bp) protein (526aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Ruminococcus RepID=C6JCE8_9FIRM
GMP synthase
L2_013_245G1_scaffold_938_8
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11400..12488
DNA (1089bp) protein (363aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NCB0_CLOSV
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS07611.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
integrase family protein
L2_013_245G1_scaffold_938_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12531..12854
DNA (324bp) protein (108aa)
N-6 DNA methylase superfamily protein (Modular protein) n=3 Tax=Clostridium difficile RepID=U3UZJ7_CLODI
SNF2 family protein {ECO:0000313|EMBL:CCK87093.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
adenine-specific DNA methylase
L2_013_245G1_scaffold_938_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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12974..13942
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WVA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70351.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
ORF6N domain.
L2_013_245G1_scaffold_938_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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13959..14714
DNA (756bp) protein (252aa)
Hydrolase, NUDIX family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BG31_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDM63242.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ADP-ribose pyrophosphatase
L2_013_245G1_scaffold_938_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14718..15560
DNA (843bp) protein (281aa)
Sortase, SrtB family n=4 Tax=Clostridiales RepID=D5Q4F9_CLODI
SrtB family sortase {ECO:0000313|EMBL:CCK87099.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
sortase, SrtB family
L2_013_245G1_scaffold_938_13
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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15587..16405
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FE9808
Sterile alpha and TIR motif-containing protein 1 {ECO:0000313|EMBL:CDD69678.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
TIR protein
Displaying 13 items

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