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L2_013_245G1_scaffold_983

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_245G1_scaffold_983_1
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(77..1228)
DNA (1152bp) protein (384aa)
DNA-binding transcriptional activator of the SARP family n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLC9_9FIRM
DNA-binding transcriptional activator of the SARP family {ECO:0000313|EMBL:CDA25454.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
DNA-binding transcriptional activator of the SARP family
L2_013_245G1_scaffold_983_2
unknown

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1479..1622
DNA (144bp) protein (48aa)

This feature has no annotations

L2_013_245G1_scaffold_983_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1672..2409)
DNA (738bp) protein (246aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77484.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_983_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2435..4177)
DNA (1743bp) protein (581aa)
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] (EC:2.2.1.6)
Thiamine pyrophosphate protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP74_9FIRM
Thiamine pyrophosphate protein {ECO:0000313|EMBL:CDD80064.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_983_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4189..5349)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77486.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_983_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5370..7664)
DNA (2295bp) protein (765aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80068.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LPS biosynthesis protein
L2_013_245G1_scaffold_983_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7668..8969)
DNA (1302bp) protein (434aa)
Glycerol-3-phosphate cytidyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ15_9FIRM
Glycerol-3-phosphate cytidyltransferase {ECO:0000313|EMBL:CDD80070.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
cytidyltransferase-related domain
L2_013_245G1_scaffold_983_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9320..10777)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JHS8_9FIRM
Acyltransferase {ECO:0000313|EMBL:CDD80158.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Fucose 4-O-acetylase and related acetyltransferases
L2_013_245G1_scaffold_983_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10893..11642)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77489.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Glycosyltransferases involved in cell wall biogenesis
L2_013_245G1_scaffold_983_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11645..13045)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80524.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L2_013_245G1_scaffold_983_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13310..14449
DNA (1140bp) protein (380aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCJ7_9FIRM
L2_013_245G1_scaffold_983_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14451..15566
DNA (1116bp) protein (372aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80160.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_983_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16339..16932
DNA (594bp) protein (198aa)
50S ribosomal protein L25 n=2 Tax=Ruminococcus RepID=C6JCJ9_9FIRM
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LSU ribosomal protein L25P
L2_013_245G1_scaffold_983_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17018..17374)
DNA (357bp) protein (119aa)
Amino acid permease n=1 Tax=Blautia sp. KLE 1732 RepID=U2DNJ2_9FIRM
Amino acid permease {ECO:0000313|EMBL:ERI98038.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Amino acid transporters
L2_013_245G1_scaffold_983_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17524..19227)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80162.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
PucR family transcriptional regulator
L2_013_245G1_scaffold_983_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19357..19992)
DNA (636bp) protein (212aa)
Methylmalonyl-CoA mutase domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK1_9FIRM
Methylmalonyl-CoA mutase domain-containing protein {ECO:0000313|EMBL:EES77495.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
methyltransferase cognate corrinoid protein
L2_013_245G1_scaffold_983_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20396..20935)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77497.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_983_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20929..22695)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77498.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_983_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23106..23744)
DNA (639bp) protein (213aa)
Methanosarcina family methyltransferase cognate corrinoid protein n=2 Tax=Ruminococcus RepID=C6JCK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75923.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted cobalamin binding protein
L2_013_245G1_scaffold_983_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23812..24627)
DNA (816bp) protein (272aa)
Methyl corrinoid protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDA1_9FIRM
Methyl corrinoid protein {ECO:0000313|EMBL:CDD75920.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Pterin binding enzyme.
L2_013_245G1_scaffold_983_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24749..25783)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77501.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
uroporphyrinogen-III decarboxylase
L2_013_245G1_scaffold_983_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26237..27148
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77502.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_245G1_scaffold_983_23
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27369..28349
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34068.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_013_245G1_scaffold_983_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28423..28866
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CCU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75911.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_245G1_scaffold_983_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29244..30374)
DNA (1131bp) protein (377aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
malate dehydrogenase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F1E1BE
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:CDD75910.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_245G1_scaffold_983_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30664..31512
DNA (849bp) protein (283aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
zinc ribbon NADH pyrophosphatase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003054724
Uncharacterized protein {ECO:0000313|EMBL:EES77506.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_245G1_scaffold_983_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31662..32804)
DNA (1143bp) protein (381aa)
molecular chaperone DnaJ n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002ECF921
Uncharacterized protein {ECO:0000313|EMBL:CDD77849.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L2_013_245G1_scaffold_983_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32927..33166)
DNA (240bp) protein (80aa)
heat shock protein Hsp20 n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E3CE2A
Uncharacterized protein {ECO:0000313|EMBL:EES77508.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
Displaying 28 items

View Taxonomy