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L2_013_371G1_scaffold_1066

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_1066_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(77..2452)
DNA (2376bp) protein (792aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7ABG0_9PORP
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EDN87593.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
HsdR family type I site-specific deoxyribonuclease
L2_013_371G1_scaffold_1066_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2482..3087)
DNA (606bp) protein (202aa)
Type 1 restriction endonuclease HsdSIB n=1 Tax=Bacillus licheniformis (strain DSM 13 / ATCC 14580) RepID=Q65MN4_BACLD
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:KDS51554.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hsdSIB; type I RM system specificity subunit HsdIB
L2_013_371G1_scaffold_1066_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3056..3712)
DNA (657bp) protein (219aa)
Type I restriction-modification system specificity subunit n=1 Tax=Enterococcus faecium 1,231,408 RepID=C9BW97_ENTFC
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:KDS51554.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
restriction modification system specificity subunit
L2_013_371G1_scaffold_1066_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3696..6284)
DNA (2589bp) protein (863aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:KDS51555.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KDS51555.1};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
type I restriction system adenine methylase (hsdM) (EC:2.1.1.72)
Type I restriction-modification system, M subunit n=2 Tax=Bacteroides fragilis RepID=I9BMA6_BACFG
L2_013_371G1_scaffold_1066_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6396..6605)
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=3 Tax=Bacteroidales RepID=A7ABG3_9PORP
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN87596.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
helix-turn-helix domain-containing protein
L2_013_371G1_scaffold_1066_6
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6815..7681
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9QWJ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY34226.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
hypothetical protein
L2_013_371G1_scaffold_1066_7
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7819..8223)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0QZH0_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY35115.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
L2_013_371G1_scaffold_1066_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8259..9197)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YBH9_9PORP
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEC95158.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Relaxase/mobilization nuclease
L2_013_371G1_scaffold_1066_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9187..9495)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6ANE7_9PORP
Ribbon-helix-helix protein, CopG family {ECO:0000313|EMBL:EEC95157.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
L2_013_371G1_scaffold_1066_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9635..10690)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S8A0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS51563.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L2_013_371G1_scaffold_1066_11
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10774..12141)
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S899_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL81103.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
hypothetical protein
L2_013_371G1_scaffold_1066_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12153..12521)
DNA (369bp) protein (123aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9IS00_BACVU
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EIY76439.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
DNA binding domain, excisionase family
L2_013_371G1_scaffold_1066_13
unknown

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12674..12739
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 13 items

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