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L2_013_371G1_scaffold_1216

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_1216_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..350)
DNA (348bp) protein (116aa)
UDP-N-acetylglucosamine 4,6-dehydratase {ECO:0000313|EMBL:KDS31718.1}; EC=4.2.1.- {ECO:0000313|EMBL:KDS31718.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Polysaccharide biosynthesis protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K130_9BACE
nucleoside-diphosphate sugar epimerase
L2_013_371G1_scaffold_1216_2
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(587..1021)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 9_1_42FAA RepID=C3PVG6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO59315.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
hypothetical protein
L2_013_371G1_scaffold_1216_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1057..1557
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6L7I5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF19006.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_013_371G1_scaffold_1216_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1578..1946
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3U3_9BACE
Bacterial DNA-binding family protein {ECO:0000313|EMBL:KDS31715.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L2_013_371G1_scaffold_1216_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1951..2088
DNA (138bp) protein (46aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C3PVG9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS56433.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_013_371G1_scaffold_1216_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2085..2504
DNA (420bp) protein (140aa)
N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacteroides RepID=D4VE32_BACVU
N-acetylmuramoyl-L-alanine amidase
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ABR41651.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_013_371G1_scaffold_1216_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2570..3400)
DNA (831bp) protein (277aa)
Putative transcriptional regulator UpxY-like protein n=2 Tax=Bacteroides vulgatus RepID=A6L7I8_BACV8
transcriptional regulator UpxY-like protein
Putative transcriptional regulator UpxY-like protein {ECO:0000313|EMBL:ABR41652.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_013_371G1_scaffold_1216_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3824..5863)
DNA (2040bp) protein (680aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z1B2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF19011.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L2_013_371G1_scaffold_1216_9
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5882..7231)
DNA (1350bp) protein (450aa)
Glycoside hydrolase family 29 n=7 Tax=Bacteroides RepID=A6L7J0_BACV8
glycoside hydrolase
Glycoside hydrolase family 29 {ECO:0000313|EMBL:EFV66443.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_013_371G1_scaffold_1216_10
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7356..8213
DNA (858bp) protein (286aa)
DNA/RNA non-specific endonuclease n=6 Tax=Bacteroides RepID=C6Z1B0_9BACE
endonuclease
Endonuclease {ECO:0000313|EMBL:EFV66442.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_013_371G1_scaffold_1216_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8303..9826)
DNA (1524bp) protein (508aa)
Glycoside hydrolase family 51, candidate alpha-L-arabinofuranosidase n=6 Tax=Bacteroides RepID=A6L7J2_BACV8
Alpha-N-arabinofuranosidase 2 {ECO:0000313|EMBL:EOS04495.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
alpha-L-arabinofuranosidase
L2_013_371G1_scaffold_1216_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10027..11061
DNA (1035bp) protein (345aa)
Putative aminodeoxychorismate lyase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L7J3_BACV8
aminodeoxychorismate lyase
YceG-like family protein {ECO:0000313|EMBL:KDS56424.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_013_371G1_scaffold_1216_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11100..11543)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HKE2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04497.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L2_013_371G1_scaffold_1216_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11623..11739)
DNA (117bp) protein (39aa)
4Fe-4S binding domain protein n=5 Tax=Bacteroides RepID=C6Z1A7_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04497.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_013_371G1_scaffold_1216_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12204..12554)
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=8 Tax=root RepID=RL20_BACV8
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_013_371G1_scaffold_1216_16
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12666..12863)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=13 Tax=Bacteroides RepID=B6VTZ1_9BACE
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_013_371G1_scaffold_1216_17
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12935..13531)
DNA (597bp) protein (199aa)
Translation initiation factor IF-3 n=8 Tax=root RepID=IF3_BACV8
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_013_371G1_scaffold_1216_18
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13647..15587)
DNA (1941bp) protein (647aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Threonine--tRNA ligase n=4 Tax=Bacteroides RepID=C6Z1A3_9BACE
thrS; threonyl-tRNA synthetase
L2_013_371G1_scaffold_1216_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15668..17677)
DNA (2010bp) protein (670aa)
Putative exported Tpr repeat-family protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P1W5_9BACE
Putative exported Tpr repeat-family protein {ECO:0000313|EMBL:CDF19021.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L2_013_371G1_scaffold_1216_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17750..18304)
DNA (555bp) protein (185aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Peptide deformylase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HKC1_BACVU
peptide deformylase
L2_013_371G1_scaffold_1216_21
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18328..18747)
DNA (420bp) protein (140aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Putative Holliday junction resolvase n=2 Tax=Bacteroides RepID=C6Z1A0_9BACE
Holliday junction resolvase
Displaying 21 items

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