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L2_013_371G1_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_59_1
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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295..1530
DNA (1236bp) protein (412aa)
Peptidase, U32 family {ECO:0000313|EMBL:EFB34983.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFB34983.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
prtC; collagenase (EC:3.4.-.-)
Peptidase, U32 family n=2 Tax=root RepID=D1PEB5_9BACT
L2_013_371G1_scaffold_59_2
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1530..1961
DNA (432bp) protein (144aa)
Fe-S metabolism associated domain protein n=2 Tax=Prevotella RepID=D1PEB6_9BACT
Fe-S metabolism associated domain protein {ECO:0000313|EMBL:EFB34984.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Fe-S metabolism associated SufE
L2_013_371G1_scaffold_59_3
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2000..2605
DNA (606bp) protein (202aa)
RNA methylase SpoU family n=1 Tax=Prevotella sp. CAG:604 RepID=R6AX87_9BACT
RNA methylase SpoU family {ECO:0000313|EMBL:CDA53439.1}; TaxID=1262932 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
TrmH family RNA methyltransferase
L2_013_371G1_scaffold_59_4
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3182..4687)
DNA (1506bp) protein (502aa)
Coenzyme A transferase PsecoA n=2 Tax=root RepID=R6C269_9BACT
Coenzyme A transferase PsecoA {ECO:0000313|EMBL:CDA67344.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
acetyl-CoA hydrolase
L2_013_371G1_scaffold_59_5
unknown

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comp(4829..4924)
DNA (96bp) protein (32aa)

This feature has no annotations

L2_013_371G1_scaffold_59_6
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5039..6529
DNA (1491bp) protein (497aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Cysteine--tRNA ligase n=1 Tax=Prevotella copri CAG:164 RepID=R6CPS4_9BACT
cysteinyl-tRNA synthetase
L2_013_371G1_scaffold_59_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6577..8439)
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BSX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67223.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_59_8
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8565..9704
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG54_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34309.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
ATPase
L2_013_371G1_scaffold_59_9
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9749..12412
DNA (2664bp) protein (888aa)
DNA mismatch repair protein MutS n=3 Tax=root RepID=D1PG55_9BACT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
mutS_1; DNA mismatch repair protein MutS
L2_013_371G1_scaffold_59_10
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12493..13356)
DNA (864bp) protein (288aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG56_9BACT
prolipoprotein diacylglyceryl transferase
L2_013_371G1_scaffold_59_11
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13375..14478)
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG57_9BACT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
ychF; GTP-binding protein YchF
L2_013_371G1_scaffold_59_12
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14622..15458)
DNA (837bp) protein (279aa)
DNA-damage-inducible protein D n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG58_9BACT
DNA-damage-inducible protein D {ECO:0000313|EMBL:EFB34314.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_371G1_scaffold_59_13
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15652..15888)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34315.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_371G1_scaffold_59_14

Not on your lists

comp(15940..16149)
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=root RepID=D1PG61_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC49811.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_013_371G1_scaffold_59_15
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16153..18570)
DNA (2418bp) protein (806aa)
Helicase Snf2 family n=1 Tax=Prevotella copri CAG:164 RepID=R6C1M2_9BACT
Helicase Snf2 family {ECO:0000313|EMBL:CDA65361.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
SNF2-related protein
L2_013_371G1_scaffold_59_16
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19753..20136)
DNA (384bp) protein (128aa)
Superoxide reductase n=2 Tax=Prevotella RepID=D1PG65_9BACT
Superoxide reductase {ECO:0000313|EMBL:CDA65355.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_59_17
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20243..20407)
DNA (165bp) protein (55aa)
Rubredoxin n=1 Tax=Prevotella copri CAG:164 RepID=R6BWD4_9BACT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
rubredoxin
L2_013_371G1_scaffold_59_18
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20768..23530)
DNA (2763bp) protein (921aa)
polA; DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG68_9BACT
DNA polymerase type I {ECO:0000313|EMBL:CDA65353.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L2_013_371G1_scaffold_59_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23638..24615
DNA (978bp) protein (326aa)
Octaprenyl-diphosphate synthase n=2 Tax=root RepID=R6CJ72_9BACT
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:CDA65352.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
geranylgeranyl pyrophosphate synthase
L2_013_371G1_scaffold_59_20
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24798..25733)
DNA (936bp) protein (312aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG70_9BACT
L2_013_371G1_scaffold_59_21

Not on your lists

comp(25803..26147)
DNA (345bp) protein (115aa)
MazG family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BQ37_9BACT
NTP pyrophosphohydrolase MazG-related, YpjD {ECO:0000313|EMBL:EKC65958.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
MazG nucleotide pyrophosphohydrolase domain protein
L2_013_371G1_scaffold_59_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26197..26772)
DNA (576bp) protein (192aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Prevotella copri CAG:164 RepID=R6BWD2_9BACT
L2_013_371G1_scaffold_59_23
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26784..28631)
DNA (1848bp) protein (616aa)
uvrC; excinuclease ABC subunit C (EC:3.1.25.-)
UvrABC system protein C n=1 Tax=Prevotella copri CAG:164 RepID=R6BMH1_9BACT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L2_013_371G1_scaffold_59_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28754..29284)
DNA (531bp) protein (177aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Adenine phosphoribosyltransferase n=1 Tax=Prevotella copri CAG:164 RepID=R6CJ66_9BACT
putative adenine phosphoribosyltransferase
L2_013_371G1_scaffold_59_25
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29534..31405)
DNA (1872bp) protein (624aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Prevotella copri CAG:164 RepID=R6BQ33_9BACT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
glucose-inhibited division protein A
L2_013_371G1_scaffold_59_26
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31637..32320
DNA (684bp) protein (228aa)
Fumarate reductase transmemBrane cytochrome b subunit n=1 Tax=Prevotella copri CAG:164 RepID=R6BWC8_9BACT
Fumarate reductase transmemBrane cytochrome b subunit {ECO:0000313|EMBL:CDA65344.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
b558 family succinate dehydrogenase (or fumarate reductase) cytochrome B subunit
L2_013_371G1_scaffold_59_27
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32353..34335
DNA (1983bp) protein (661aa)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EFB34334.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EFB34334.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG79_9BACT
L2_013_371G1_scaffold_59_28
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34351..35109
DNA (759bp) protein (253aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.99.1)
Fumarate reductase iron-sulfur protein n=2 Tax=root RepID=R6CJ62_9BACT
Fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:CDA65342.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L2_013_371G1_scaffold_59_29
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35797..37395
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6CJS0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA65517.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
N6-adenine-specific methylase
L2_013_371G1_scaffold_59_30
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37557..39098)
DNA (1542bp) protein (514aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Carboxylesterase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PG85_9BACT
carboxylesterase type B
Displaying items 1-30 of 70 in total

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