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L2_013_371G1_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_66_1
unknown

Not on your lists

comp(3..122)
DNA (120bp) protein (40aa)

This feature has no annotations

L2_013_371G1_scaffold_66_2
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

218..577
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JX38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS34258.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_013_371G1_scaffold_66_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(604..3990)
DNA (3387bp) protein (1129aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030C27C5
Uncharacterized protein {ECO:0000313|EMBL:EES77548.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_371G1_scaffold_66_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4308..4553)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77549.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_66_5
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4727..5065)
DNA (339bp) protein (113aa)
aldo/keto reductase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C36E86
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EET59835.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
putative oxidoreductase
L2_013_371G1_scaffold_66_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5224..6435)
DNA (1212bp) protein (404aa)
stage IV sporulation protein B (EC:3.4.21.116)
Stage IV sporulation protein B n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8Z2_9FIRM
Stage IV sporulation protein B {ECO:0000313|EMBL:EES78794.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_66_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6519..8210)
DNA (1692bp) protein (564aa)
DNA repair protein RecN n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8Z3_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA replication and repair protein RecN
L2_013_371G1_scaffold_66_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8243..8701)
DNA (459bp) protein (153aa)
Arginine repressor n=2 Tax=Ruminococcus RepID=C6J8Z4_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, ArgR family
L2_013_371G1_scaffold_66_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8720..9580)
DNA (861bp) protein (287aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Ruminococcus RepID=C6J8Z5_9FIRM
L2_013_371G1_scaffold_66_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9601..10413)
DNA (813bp) protein (271aa)
RNA methyltransferase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00037DC71E
Hemolysin TlyA family protein {ECO:0000313|EMBL:EES78798.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hemolysin TlyA family protein
L2_013_371G1_scaffold_66_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10410..12281)
DNA (1872bp) protein (624aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00021618}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLJ1_9FIRM
L2_013_371G1_scaffold_66_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12295..13182)
DNA (888bp) protein (296aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78800.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_66_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13166..13405)
DNA (240bp) protein (80aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Exonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=2 Tax=Ruminococcus RepID=C6J8Z9_9FIRM
L2_013_371G1_scaffold_66_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13392..14612)
DNA (1221bp) protein (407aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKQ5_9FIRM
L2_013_371G1_scaffold_66_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14609..14959)
DNA (351bp) protein (117aa)
Transcription antitermination factor NusB n=2 Tax=Ruminococcus RepID=C6J901_9FIRM
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcription antitermination factor NusB
L2_013_371G1_scaffold_66_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15096..15482)
DNA (387bp) protein (129aa)
alkaline shock protein 23 n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000315895F
Uncharacterized protein {ECO:0000313|EMBL:EES78804.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_371G1_scaffold_66_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15551..17140)
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J903_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
peptide chain release factor 3
L2_013_371G1_scaffold_66_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17315..18106)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J904_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77044.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_371G1_scaffold_66_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18117..18443)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77045.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_371G1_scaffold_66_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18421..18984)
DNA (564bp) protein (188aa)
Stage III sporulation protein AF n=2 Tax=Ruminococcus RepID=C6J906_9FIRM
Stage III sporulation protein AF {ECO:0000313|EMBL:EES78808.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Stage III sporulation protein AF (Spore_III_AF).
L2_013_371G1_scaffold_66_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19045..20271)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77047.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Stage III sporulation protein AE (spore_III_AE).
L2_013_371G1_scaffold_66_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20268..20654)
DNA (387bp) protein (129aa)
Stage III sporulation protein AD n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J908_9FIRM
Stage III sporulation protein AD {ECO:0000313|EMBL:EES78810.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Stage III sporulation protein AC/AD protein family.
L2_013_371G1_scaffold_66_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20748..20978)
DNA (231bp) protein (77aa)
Stage III sporulation protein AC n=2 Tax=Ruminococcus RepID=C6J909_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:EES78811.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
stage III sporulation protein AC
L2_013_371G1_scaffold_66_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20978..21466)
DNA (489bp) protein (163aa)
Stage III sporulation protein AB n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J910_9FIRM
Stage III sporulation protein AB {ECO:0000313|EMBL:EES78812.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Stage III sporulation protein AB (spore_III_AB).
L2_013_371G1_scaffold_66_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21481..22419)
DNA (939bp) protein (313aa)
Stage III sporulation protein AA n=2 Tax=Ruminococcus RepID=C6J911_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77051.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
stage III sporulation protein AA
L2_013_371G1_scaffold_66_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22508..23635)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J912_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78814.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_371G1_scaffold_66_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23639..24193)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J913_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78815.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphopantetheinyl transferase
L2_013_371G1_scaffold_66_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24190..26016)
DNA (1827bp) protein (609aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J914_9FIRM
L2_013_371G1_scaffold_66_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26019..27470)
DNA (1452bp) protein (484aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
glutamyl-tRNA synthetase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00035FA143
L2_013_371G1_scaffold_66_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27660..29375)
DNA (1716bp) protein (572aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00057375}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
acetyl-CoA carboxylase carboxyl transferase subunit beta n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F1968A
Displaying items 1-30 of 82 in total

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