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L2_013_371G1_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_82_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..958)
DNA (957bp) protein (319aa)
IS605 OrfB family transposase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD79_9FIRM
IS605 OrfB family transposase {ECO:0000313|EMBL:EES77128.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transposase, IS605 OrfB family, central region
L2_013_371G1_scaffold_82_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1136..1420)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79180.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_371G1_scaffold_82_3
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1438..1818)
DNA (381bp) protein (127aa)
Death-on-curing family protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S1E3_9FIRM
Death-on-curing family protein {ECO:0000313|EMBL:EFF68033.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
death-on-curing family protein
L2_013_371G1_scaffold_82_4
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1815..2057)
DNA (243bp) protein (81aa)
Prevent-host-death family protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S1E4_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EFF68034.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Phd_YefM.
L2_013_371G1_scaffold_82_5
unknown

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comp(2423..2593)
DNA (171bp) protein (57aa)

This feature has no annotations

L2_013_371G1_scaffold_82_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2775..3713)
DNA (939bp) protein (313aa)
elongation factor Ts n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031183FA
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
translation elongation factor Ts (EF-Ts)
L2_013_371G1_scaffold_82_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3813..4556)
DNA (744bp) protein (248aa)
30S ribosomal protein S2 n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003060993
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
SSU ribosomal protein S2P
L2_013_371G1_scaffold_82_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4754..5521)
DNA (768bp) protein (256aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.12 5.4.99.-)
RNA pseudouridine synthase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EDFA28
L2_013_371G1_scaffold_82_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5624..6274)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EA7033
Uncharacterized protein {ECO:0000313|EMBL:EES78542.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
CAAX amino terminal protease family.
L2_013_371G1_scaffold_82_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6463..7110)
DNA (648bp) protein (216aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
5''''-nucleotidase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000315F08F
Uncharacterized protein {ECO:0000313|EMBL:CDD77245.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_371G1_scaffold_82_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7193..8188)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77246.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
cell surface protein
L2_013_371G1_scaffold_82_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8172..9428)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J893_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78545.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Serine/threonine protein kinase fused to TPR repeats domain
L2_013_371G1_scaffold_82_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9666..11414)
DNA (1749bp) protein (583aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F5061C
L2_013_371G1_scaffold_82_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11545..12417)
DNA (873bp) protein (291aa)
DegV family EDD domain-containing protein n=2 Tax=Ruminococcus RepID=C6J895_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EES78547.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
EDD domain protein, DegV family
L2_013_371G1_scaffold_82_15
unknown

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comp(12671..12778)
DNA (108bp) protein (36aa)

This feature has no annotations

L2_013_371G1_scaffold_82_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12884..14500)
DNA (1617bp) protein (539aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=2 Tax=Ruminococcus RepID=C6J896_9FIRM
L2_013_371G1_scaffold_82_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14518..14775)
DNA (258bp) protein (86aa)
HPr family phosphocarrier n=2 Tax=Ruminococcus RepID=C6J897_9FIRM
PTS system phosphocarrier protein Hpr {ECO:0000313|EMBL:CDD77258.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphotransferase system, phosphocarrier protein HPr
L2_013_371G1_scaffold_82_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15051..16310)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J898_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78550.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type antimicrobial peptide transport system, permease component
L2_013_371G1_scaffold_82_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16329..18347)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J899_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78551.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_371G1_scaffold_82_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18353..19024)
DNA (672bp) protein (224aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80461.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_371G1_scaffold_82_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19021..20523)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80460.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Membrane-fusion protein
L2_013_371G1_scaffold_82_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20802..22013
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78554.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_371G1_scaffold_82_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22158..22916)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78555.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted permeases
L2_013_371G1_scaffold_82_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22919..24715)
DNA (1797bp) protein (599aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR32_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDD80455.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_371G1_scaffold_82_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24812..26098)
DNA (1287bp) protein (429aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine-tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A5_9FIRM
Histidine-tRNA ligase {ECO:0000313|EMBL:EES78557.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_82_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26143..26727)
DNA (585bp) protein (195aa)
Metal dependent phosphohydrolase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR92_9FIRM
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDD80451.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HD-GYP domain
L2_013_371G1_scaffold_82_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26745..28247)
DNA (1503bp) protein (501aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80450.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_371G1_scaffold_82_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28240..28869)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80449.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Zn-dependent hydrolases, including glyoxylases
L2_013_371G1_scaffold_82_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28902..31232)
DNA (2331bp) protein (777aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A9_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:EES78561.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_82_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31270..31794)
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=2 Tax=Ruminococcus RepID=C6J8B0_9FIRM
Displaying items 1-30 of 72 in total

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