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L2_013_371G1_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_109_1
unknown

Not on your lists

comp(88..339)
DNA (252bp) protein (84aa)
hypothetical protein
L2_013_371G1_scaffold_109_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(347..2047)
DNA (1701bp) protein (567aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
glycogen synthase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030A714C
L2_013_371G1_scaffold_109_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2609..3085)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78893.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Acetyltransferases
L2_013_371G1_scaffold_109_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3075..3323)
DNA (249bp) protein (83aa)
HipA domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLJ8_9FIRM
HipA domain-containing protein {ECO:0000313|EMBL:CDD78891.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HipA N-terminal domain
L2_013_371G1_scaffold_109_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3446..4024
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76356.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulator
L2_013_371G1_scaffold_109_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4056..5600)
DNA (1545bp) protein (515aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
acyl-CoA thioester hydrolase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D71E5A
Uncharacterized protein {ECO:0000313|EMBL:CDD78886.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_371G1_scaffold_109_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5704..5934)
DNA (231bp) protein (77aa)
Acyl carrier protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF11_9FIRM
Acyl carrier protein {ECO:0000313|EMBL:EES76358.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Acyl carrier protein
L2_013_371G1_scaffold_109_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5961..7349)
DNA (1389bp) protein (463aa)
lichenysin synthetase A n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E4CDFD
Uncharacterized protein {ECO:0000313|EMBL:CDD78883.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Condensation domain.
L2_013_371G1_scaffold_109_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7650..8636)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78881.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Prolyl oligopeptidase family.
L2_013_371G1_scaffold_109_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8638..12015)
DNA (3378bp) protein (1126aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F573D6
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EES76361.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
diguanylate cyclase (GGDEF) domain
L2_013_371G1_scaffold_109_11
unknown

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comp(12133..12279)
DNA (147bp) protein (49aa)

This feature has no annotations

L2_013_371G1_scaffold_109_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12337..13551)
DNA (1215bp) protein (405aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
carboxynorspermidine decarboxylase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003167A07
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CCY33561.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L2_013_371G1_scaffold_109_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13551..14810)
DNA (1260bp) protein (420aa)
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Carboxynorspermidine dehydrogenase {ECO:0000313|EMBL:CBL25539.1}; EC=1.5.1.7 {ECO:0000313|EMBL:CBL25539.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Carboxynorspermidine dehydrogenase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2S7_9FIRM
L2_013_371G1_scaffold_109_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14892..15749)
DNA (858bp) protein (286aa)
agmatinase (EC:3.5.3.11)
agmatinase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031B350B
Agmatinase {ECO:0000313|EMBL:CCY33559.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L2_013_371G1_scaffold_109_15
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15753..16607)
DNA (855bp) protein (285aa)
spermidine synthase (EC:2.5.1.16)
spermidine synthase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F4A560
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L2_013_371G1_scaffold_109_16
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16613..18079)
DNA (1467bp) protein (489aa)
arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase {ECO:0000313|EMBL:CBL22837.1}; EC=4.1.1.19 {ECO:0000313|EMBL:CBL22837.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
arginine decarboxylase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00035CE5DB
L2_013_371G1_scaffold_109_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18630..19907)
DNA (1278bp) protein (426aa)
membrane protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DCB73D
UPF0597 protein RSAG_02535 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
serine dehydratase subunit alpha
L2_013_371G1_scaffold_109_18
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20081..20461)
DNA (381bp) protein (127aa)
Predicted AAA-ATPase n=1 Tax=Blautia sp. CAG:257 RepID=R5X1X7_9FIRM
Predicted AAA-ATPase {ECO:0000313|EMBL:CDA06334.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Predicted AAA-ATPase.
L2_013_371G1_scaffold_109_19
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20492..21379)
DNA (888bp) protein (296aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2DFK0_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDE33469.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Predicted membrane protein
L2_013_371G1_scaffold_109_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21879..22811
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79579.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted permeases
L2_013_371G1_scaffold_109_21
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23113..25134)
DNA (2022bp) protein (674aa)
Predicted permease n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LYK3_9FIRM
Predicted permease.
Predicted permease {ECO:0000313|EMBL:CBL22706.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_013_371G1_scaffold_109_22
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25127..25894)
DNA (768bp) protein (256aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LYK4_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
Putative bacteriocin export ABC transporter, lactococcin 972 group {ECO:0000313|EMBL:EDM87424.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L2_013_371G1_scaffold_109_23
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26095..27147)
DNA (1053bp) protein (351aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LYK5_9FIRM
Signal transduction histidine kinase
L2_013_371G1_scaffold_109_24
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27176..27844)
DNA (669bp) protein (223aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DC47_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDD88164.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_013_371G1_scaffold_109_25
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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comp(27880..27972)
DNA (93bp) protein (31aa)
Multimeric flavodoxin WrbA n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N993_9FIRM
Multimeric flavodoxin WrbA {ECO:0000313|EMBL:CDF08682.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
Multimeric flavodoxin WrbA
L2_013_371G1_scaffold_109_26
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28227..28859)
DNA (633bp) protein (211aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.32)
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region {ECO:0000313|EMBL:CBL20573.1}; EC=4.2.1.32 {ECO:0000313|EMBL:CBL20573.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LL62_9FIRM
L2_013_371G1_scaffold_109_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28875..29780)
DNA (906bp) protein (302aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.32)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97687.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L2_013_371G1_scaffold_109_28
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30048..30290)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31984.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Di-and tricarboxylate transporters
L2_013_371G1_scaffold_109_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30434..31033
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HQI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31985.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Transcriptional regulator
L2_013_371G1_scaffold_109_30
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31270..31779)
DNA (510bp) protein (170aa)
HipA domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PXF1_9FIRM
HipA domain protein {ECO:0000313|EMBL:EKY20419.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
Displaying items 1-30 of 65 in total

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