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L2_013_371G1_scaffold_141

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_141_1
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2..160)
DNA (159bp) protein (53aa)
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
L2_013_371G1_scaffold_141_2
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(173..1459)
DNA (1287bp) protein (429aa)
TRAP transporter, DctM subunit n=9 Tax=Clostridium RepID=N9WNA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24927.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
TRAP dicarboxylate transporter subunit DctM
L2_013_371G1_scaffold_141_3
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(1452..1946)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PVH1_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO79675.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
tripartite ATP-independent periplasmic transporter DctQ
L2_013_371G1_scaffold_141_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1959..3062)
DNA (1104bp) protein (368aa)
DctP family TRAP transporter solute receptor n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XHR7_9CLOT
TRAP dicarboxylate transporter subunit DctP
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ14765.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L2_013_371G1_scaffold_141_5
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3092..3427)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AST9_9FIRM
hypothetical protein
Tax=RBG_13_Actinobacteria_35_12_curated
L2_013_371G1_scaffold_141_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3442..4248)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0MVX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF38484.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_013_371G1_scaffold_141_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4576..5622)
DNA (1047bp) protein (349aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium sp. MSTE9 RepID=J0MV82_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EJF38204.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
transcriptional regulator
L2_013_371G1_scaffold_141_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5837..6295
DNA (459bp) protein (153aa)
Putative diguanylate cyclase AdrA {ECO:0000313|EMBL:KJJ75539.1}; EC=2.7.7.65 {ECO:0000313|EMBL:KJJ75539.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HP93_9CLOT
signaling protein
L2_013_371G1_scaffold_141_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6311..7642
DNA (1332bp) protein (444aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Beta-glucosidase-related glycosidases (EC:3.2.1.52)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D0H0_9CLOT
L2_013_371G1_scaffold_141_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7809..9161
DNA (1353bp) protein (451aa)
Transporter n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVU7_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
sodium:neurotransmitter symporter
L2_013_371G1_scaffold_141_11
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9242..10564)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KRU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49053.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
transcriptional regulator, GntR family
L2_013_371G1_scaffold_141_12
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

10810..12069
DNA (1260bp) protein (420aa)
Putative methyltransferase CmuC id=4616333 bin=GWC2_Clostridiales_40_7 species=Clostridium sp. D5 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
methyltransferase CmuC
Tax=GWC2_Clostridiales_40_7_curated
L2_013_371G1_scaffold_141_13
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12081..13349
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TGK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72518.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
iron-sulfur cluster-binding protein
L2_013_371G1_scaffold_141_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13361..14722
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00036E4869
Gluconate:H+ symporter (GntP) family transporter {ECO:0000313|EMBL:ENZ43200.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
gntP; gluconate transporter
L2_013_371G1_scaffold_141_15
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14818..15717)
DNA (900bp) protein (300aa)
LysR substrate binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU41_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:ETP71815.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
transcriptional regulator, LysR family
L2_013_371G1_scaffold_141_16
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15911..17227
DNA (1317bp) protein (439aa)
Divalent anion:Na+ symporter (DASS) family transporter n=8 Tax=Clostridium RepID=N9XIJ9_9CLOT
Di-/tricarboxylate transporter {ECO:0000313|EMBL:ETP73078.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
anion transporter
L2_013_371G1_scaffold_141_17
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17254..18135
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CU59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG57368.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
metallo-beta-lactamase
L2_013_371G1_scaffold_141_18
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18308..20518
DNA (2211bp) protein (737aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6S1_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEG52968.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transcriptional regulator
L2_013_371G1_scaffold_141_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20818..21618
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG52965.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
glycerophosphoryl diester phosphodiesterase
L2_013_371G1_scaffold_141_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21661..22986
DNA (1326bp) protein (442aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6R7_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEG52964.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
putative ABC transporter-binding protein DR_1438 precursor
L2_013_371G1_scaffold_141_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23009..23887
DNA (879bp) protein (293aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6R6_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG52963.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
sugar ABC transporter permease
L2_013_371G1_scaffold_141_22
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23888..24724
DNA (837bp) protein (279aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6R5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG52962.1}; Flags: Fragment;; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
binding-protein-dependent transporters inner membrane component
L2_013_371G1_scaffold_141_23
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24770..25456
DNA (687bp) protein (229aa)
MgtC/SapB transporter n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T796_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EXG88023.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L2_013_371G1_scaffold_141_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25952..27130
DNA (1179bp) protein (393aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Clostridium sp. CAG:7 RepID=R5IEW5_9CLOT
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_013_371G1_scaffold_141_25
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27112..27753
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TGU8_9FIRM
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EMZ20304.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
riboflavin synthase
L2_013_371G1_scaffold_141_26
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27769..28968
DNA (1200bp) protein (400aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium sp. MSTE9 RepID=J1GZB7_9CLOT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase
L2_013_371G1_scaffold_141_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28985..29452
DNA (468bp) protein (156aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9 2.5.1.-)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=[Clostridium] glycolicum RepID=UPI00036B6745
L2_013_371G1_scaffold_141_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29517..30584
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58232.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_371G1_scaffold_141_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30597..31133
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58231.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_371G1_scaffold_141_30
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31299..31823
DNA (525bp) protein (175aa)
VanZ family protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQS3_9FIRM
VanZ family protein {ECO:0000313|EMBL:CCY30489.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
VanZ family protein
Displaying items 1-30 of 53 in total

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