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L2_013_371G1_scaffold_170

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_170_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

414..974
DNA (561bp) protein (187aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=4 Tax=Clostridium RepID=U2DGX8_CLOSY
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EHF05280.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L2_013_371G1_scaffold_170_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1045..1860
DNA (816bp) protein (272aa)
ABC-2 type transporter n=2 Tax=Clostridium symbiosum RepID=E9SJI3_CLOSY
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L2_013_371G1_scaffold_170_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2053..2289
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SJI4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05278.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_013_371G1_scaffold_170_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2432..3217)
DNA (786bp) protein (262aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=2 Tax=Clostridium symbiosum RepID=E7GHG0_CLOSY
L2_013_371G1_scaffold_170_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3210..4394)
DNA (1185bp) protein (395aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
tryptophan synthase, beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=2 Tax=Clostridium symbiosum RepID=E7GHF9_CLOSY
L2_013_371G1_scaffold_170_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4391..5002)
DNA (612bp) protein (204aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=3 Tax=Clostridium RepID=E7GHF8_CLOSY
L2_013_371G1_scaffold_170_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4999..5808)
DNA (810bp) protein (270aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJI8_CLOSY
L2_013_371G1_scaffold_170_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5820..6830)
DNA (1011bp) protein (337aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJI9_CLOSY
L2_013_371G1_scaffold_170_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7002..7571)
DNA (570bp) protein (190aa)
trpG; putative anthranilate synthase component II (EC:4.1.3.27)
Glutamine amidotransferase, class I n=2 Tax=Clostridium symbiosum RepID=E9SJJ0_CLOSY
Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:ERI75788.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L2_013_371G1_scaffold_170_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7568..9055)
DNA (1488bp) protein (496aa)
anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BCD1_CLOSY
Anthranilate synthase component I {ECO:0000313|EMBL:ERI75789.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L2_013_371G1_scaffold_170_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9480..9623)
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6GKP6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC14347.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_013_371G1_scaffold_170_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10308..10652)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SJJ3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05269.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_013_371G1_scaffold_170_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10730..11194)
DNA (465bp) protein (155aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=4 Tax=Clostridium RepID=E7GHF1_CLOSY
L2_013_371G1_scaffold_170_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11618..13795
DNA (2178bp) protein (726aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05267.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Signal transduction histidine kinase
L2_013_371G1_scaffold_170_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13913..14416
DNA (504bp) protein (168aa)
Sigma-70 region 2 n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BU19_CLOSY
Sigma-70 region 2 {ECO:0000313|EMBL:ERI75720.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
DNA-directed RNA polymerase subunit sigma
L2_013_371G1_scaffold_170_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14406..15338
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05265.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_013_371G1_scaffold_170_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15580..16833
DNA (1254bp) protein (418aa)
Citrate transporter n=2 Tax=Clostridium symbiosum RepID=E7GHE7_CLOSY
Citrate transporter {ECO:0000313|EMBL:EGA95780.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
citrate transporter family protein
L2_013_371G1_scaffold_170_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16852..17694
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05263.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_013_371G1_scaffold_170_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18351..19712
DNA (1362bp) protein (454aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridium RepID=E9SJK0_CLOSY
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI75727.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L2_013_371G1_scaffold_170_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19738..20550
DNA (813bp) protein (271aa)
Glycosyl transferase n=3 Tax=Clostridium symbiosum RepID=E7GHE4_CLOSY
Glycosyl transferase {ECO:0000313|EMBL:EGA95777.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_013_371G1_scaffold_170_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20557..23712
DNA (3156bp) protein (1052aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJK2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95776.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted glycosyltransferases
L2_013_371G1_scaffold_170_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23776..24501
DNA (726bp) protein (242aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BU27_CLOSY
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI75730.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
DNA-binding domain-containing protein
L2_013_371G1_scaffold_170_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24670..25833)
DNA (1164bp) protein (388aa)
Rubredoxin-oxygen oxidoreductase n=2 Tax=Clostridium symbiosum RepID=E7GHE1_CLOSY
Rubredoxin-oxygen oxidoreductase {ECO:0000313|EMBL:EGA95774.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Uncharacterized flavoproteins
L2_013_371G1_scaffold_170_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26071..26967)
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=4 Tax=Clostridium RepID=U2D2P1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95773.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator, LysR family
L2_013_371G1_scaffold_170_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27620..28768
DNA (1149bp) protein (383aa)
Mandelate racemase/muconate lactonizing enzyme protein n=2 Tax=Clostridium symbiosum RepID=U2BU28_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95771.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
mandelate racemase/muconate lactonizing protein
L2_013_371G1_scaffold_170_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28914..30293
DNA (1380bp) protein (460aa)
Transporter, SSS family n=2 Tax=Clostridium symbiosum RepID=E9SJK8_CLOSY
Transporter, SSS family {ECO:0000313|EMBL:ERI75736.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Sodium:solute symporter
L2_013_371G1_scaffold_170_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30341..30943
DNA (603bp) protein (201aa)
NADPH nitroreductase n=3 Tax=Clostridium RepID=E7GHD6_CLOSY
NADPH nitroreductase {ECO:0000313|EMBL:EGA95769.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
nitroreductase
L2_013_371G1_scaffold_170_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30970..31782
DNA (813bp) protein (271aa)
Enoyl-CoA hydratase/isomerase family protein n=2 Tax=Clostridium RepID=U2BVB7_CLOSY
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:ERI75738.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
enoyl-CoA hydratase/isomerase
L2_013_371G1_scaffold_170_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31806..33104
DNA (1299bp) protein (433aa)
4-hydroxybutyrate coenzyme A transferase n=2 Tax=Clostridium RepID=E9SJL1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05305.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
acetyl-CoA hydrolase
L2_013_371G1_scaffold_170_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33352..33831
DNA (480bp) protein (160aa)
Thioesterase superfamily protein n=4 Tax=Clostridium RepID=E7GHD3_CLOSY
Thioesterase superfamily protein {ECO:0000313|EMBL:EGA95766.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
acyl-CoA hydrolase
Displaying items 1-30 of 48 in total

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