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L2_013_371G1_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_214_1
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1009
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02675.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L2_013_371G1_scaffold_214_2
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1099..1356
DNA (258bp) protein (86aa)
Phosphocarrier protein HPr n=2 Tax=root RepID=R6VZV9_9CLOT
Phosphocarrier protein HPr {ECO:0000313|EMBL:CDD02685.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
phosphocarrier protein HPr
L2_013_371G1_scaffold_214_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1394..3046
DNA (1653bp) protein (551aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=3 Tax=root RepID=R6VVD8_9CLOT
L2_013_371G1_scaffold_214_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3040..3783
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02700.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Transcriptional regulators of sugar metabolism
L2_013_371G1_scaffold_214_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3894..5246
DNA (1353bp) protein (451aa)
stage IV sporulation protein B (EC:3.4.21.116)
Stage IV sporulation protein B n=1 Tax=Clostridium sp. CAG:91 RepID=R6WEW1_9CLOT
Stage IV sporulation protein B {ECO:0000313|EMBL:CDD02701.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_013_371G1_scaffold_214_6
unknown

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5297..5455
DNA (159bp) protein (53aa)

This feature has no annotations

L2_013_371G1_scaffold_214_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5505..6038
DNA (534bp) protein (178aa)
Hydrolase NUDIX family n=1 Tax=Clostridium sp. CAG:91 RepID=R6X8L2_9CLOT
Hydrolase NUDIX family {ECO:0000313|EMBL:CDD02707.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Isopentenyldiphosphate isomerase
L2_013_371G1_scaffold_214_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6089..8167
DNA (2079bp) protein (693aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
UvrD/REP helicase n=2 Tax=root RepID=R6VZY1_9CLOT
hypothetical protein
L2_013_371G1_scaffold_214_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8190..9749
DNA (1560bp) protein (520aa)
Two component transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:91 RepID=R6X8M0_9CLOT
Two component transcriptional regulator AraC family {ECO:0000313|EMBL:CDD02717.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
two component AraC family transcriptional regulator
L2_013_371G1_scaffold_214_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9753..11471
DNA (1719bp) protein (573aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Histidine kinase internal region n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVG0_9CLOT
histidine kinase internal region
L2_013_371G1_scaffold_214_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11456..12451
DNA (996bp) protein (332aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium sp. CAG:91 RepID=R6W7H8_9CLOT
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDD02719.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
periplasmic binding protein/LacI transcriptional regulator
L2_013_371G1_scaffold_214_12
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

12755..13849
DNA (1095bp) protein (365aa)
Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=root RepID=R6ETE4_9FIRM
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDB00046.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
periplasmic binding protein/LacI transcriptional regulator
L2_013_371G1_scaffold_214_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13907..15424
DNA (1518bp) protein (506aa)
Galactose/methyl galactoside import ATP-binding protein MglA {ECO:0000256|HAMAP-Rule:MF_01717}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01717};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ABC transporter related n=1 Tax=Clostridium sp. CAG:91 RepID=R6WEY3_9CLOT
ABC transporter
L2_013_371G1_scaffold_214_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15431..16540
DNA (1110bp) protein (370aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Uncharacterized protein n=2 Tax=root RepID=R6X8M9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02727.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_013_371G1_scaffold_214_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16723..17385
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02728.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_371G1_scaffold_214_16
unknown

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comp(17743..17874)
DNA (132bp) protein (44aa)

This feature has no annotations

L2_013_371G1_scaffold_214_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(17901..19739)
DNA (1839bp) protein (613aa)
GTP-binding protein TypA/BipA n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F5R0_9FIRM
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CDA97332.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_013_371G1_scaffold_214_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19969..20679
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02006.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
single-stranded DNA-binding protein
L2_013_371G1_scaffold_214_19
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20791..21288
DNA (498bp) protein (166aa)
ATP:corrinoid adenosyltransferase (EC:2.5.1.17)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BXU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA68973.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L2_013_371G1_scaffold_214_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21561..22445
DNA (885bp) protein (295aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W5K7_9CLOT
dihydrodipicolinate synthase
L2_013_371G1_scaffold_214_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22625..23374
DNA (750bp) protein (250aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VTK3_9CLOT
L2_013_371G1_scaffold_214_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23650..25602
DNA (1953bp) protein (651aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 n=1 Tax=Clostridium sp. CAG:91 RepID=R6X6F3_9CLOT
L2_013_371G1_scaffold_214_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25604..26050)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01996.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_013_371G1_scaffold_214_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26186..26965
DNA (780bp) protein (260aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)m ethylideneamino)imidazole-4-carboxamide isomerase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VXW0_9CLOT
1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)m ethylideneamino)imidazole-4-carboxamide isomerase {ECO:0000313|EMBL:CDD01995.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_013_371G1_scaffold_214_25

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comp(27024..27350)
DNA (327bp) protein (109aa)
Cold-shock DNA-binding domain protein n=1 Tax=human gut metagenome RepID=K1TWM1_9ZZZZ
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EKC77527.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
cspD1; cold-shock protein D1
L2_013_371G1_scaffold_214_26
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27487..28212
DNA (726bp) protein (242aa)
Metallopeptidase M23 family n=1 Tax=Clostridium sp. CAG:91 RepID=R6X6B8_9CLOT
Metallopeptidase M23 family {ECO:0000313|EMBL:CDD01992.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
metallopeptidase M23 family protein
L2_013_371G1_scaffold_214_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28236..28784
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WCU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01991.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_371G1_scaffold_214_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28851..29159)
DNA (309bp) protein (103aa)
TrpR-like protein YerC/YecD n=1 Tax=Clostridium sp. CAG:91 RepID=R6VXV4_9CLOT
TrpR-like protein YerC/YecD {ECO:0000313|EMBL:CDD01990.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
TrpR-like protein YerC/YecD
L2_013_371G1_scaffold_214_29
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29487..30125
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W5I1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01989.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Domain of unknown function (DUF1836).
L2_013_371G1_scaffold_214_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30155..30913
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VTG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01988.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hydrolase
Displaying items 1-30 of 44 in total

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