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L2_013_371G1_scaffold_221

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_221_1
unknown

Not on your lists

comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

L2_013_371G1_scaffold_221_2
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

558..1100
DNA (543bp) protein (181aa)
Prolyl-tRNA synthetase / glutamyl-tRNA synthetase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAB5_9FIRM
Prolyl-tRNA synthetase / glutamyl-tRNA synthetase {ECO:0000313|EMBL:CDF09033.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
prolyl-tRNA synthetase / glutamyl-tRNA synthetase
L2_013_371G1_scaffold_221_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1299..3356)
DNA (2058bp) protein (686aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Beta-galactosidase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC62_9FIRM
beta-galactosidase
L2_013_371G1_scaffold_221_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3379..5166)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77357.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
multi-sensor signal transduction histidine kinase
L2_013_371G1_scaffold_221_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5168..5998)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77358.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
two component transcriptional regulator, arac family
L2_013_371G1_scaffold_221_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6075..6911)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77359.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC transporter periplasmic subunit-2
L2_013_371G1_scaffold_221_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6925..7803)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77360.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
binding-protein-dependent transport system inner membrane component
L2_013_371G1_scaffold_221_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7874..9187)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77361.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC transporter periplasmic subunit
L2_013_371G1_scaffold_221_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9429..11456)
DNA (2028bp) protein (676aa)
Beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77362.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_221_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11569..12834)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77363.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
AraC-type DNA-binding protein, response regulator
L2_013_371G1_scaffold_221_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13085..15082)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77364.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
glycoside hydrolase family protein
L2_013_371G1_scaffold_221_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15107..15943)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77365.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
binding-protein-dependent transport system inner membrane protein
L2_013_371G1_scaffold_221_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15964..16860)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77366.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
binding-protein-dependent transport systems inner membrane component
L2_013_371G1_scaffold_221_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16963..18180)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77367.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
extracellular solute-binding protein, family 1
L2_013_371G1_scaffold_221_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18282..19004)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77368.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_371G1_scaffold_221_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19019..20812)
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77369.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
histidine kinase internal region
L2_013_371G1_scaffold_221_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21157..21798)
DNA (642bp) protein (214aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC76_9FIRM
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EES77370.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_221_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21812..22882)
DNA (1071bp) protein (357aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77371.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_221_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22913..24658)
DNA (1746bp) protein (582aa)
Dihydroxyacid dehydratase/phosphogluconate dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC78_9FIRM
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:EES77372.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_221_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25282..26016)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77373.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, GntR family
L2_013_371G1_scaffold_221_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26090..27022)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77529.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulator
L2_013_371G1_scaffold_221_22
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27315..28280)
DNA (966bp) protein (322aa)
Sulfite reductase, subunit C {ECO:0000313|EMBL:EDM88612.1}; EC=1.8.-.- {ECO:0000313|EMBL:EDM88612.1};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
asrC; anaerobic sulfite reductase subunit C (EC:1.8.1.-)
Sulfite reductase, subunit C n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP16_9FIRM
L2_013_371G1_scaffold_221_23
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28294..29082)
DNA (789bp) protein (263aa)
Sulfite reductase, subunit B {ECO:0000313|EMBL:EDM88613.1}; EC=1.8.-.- {ECO:0000313|EMBL:EDM88613.1};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Sulfite reductase, subunit B n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP17_9FIRM
asrB; anaerobic sulfite reductase subunit B
L2_013_371G1_scaffold_221_24
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29084..30082)
DNA (999bp) protein (333aa)
Sulfite reductase, subunit A {ECO:0000313|EMBL:EDM88614.1}; EC=1.8.-.- {ECO:0000313|EMBL:EDM88614.1};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Sulfite reductase, subunit A n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP18_9FIRM
asrA; anaerobic sulfite reductase subunit A
L2_013_371G1_scaffold_221_25
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30097..30786)
DNA (690bp) protein (230aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP19_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDM88615.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
CRP/FNR family transcriptional regulator
L2_013_371G1_scaffold_221_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31025..31429)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77531.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_371G1_scaffold_221_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31867..33090
DNA (1224bp) protein (408aa)
amino acid:cation symporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E90137
Uncharacterized protein {ECO:0000313|EMBL:CDD77532.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Na+/H+-dicarboxylate symporters
L2_013_371G1_scaffold_221_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33197..33595)
DNA (399bp) protein (133aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77385.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_221_29
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33701..34279)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E23962
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK99238.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_013_371G1_scaffold_221_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34763..35758
DNA (996bp) protein (332aa)
ABC transporter substrate-binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DF0FE2
Uncharacterized protein {ECO:0000313|EMBL:EES77386.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
TRAP-type C4-dicarboxylate transport system, small permease component
Displaying items 1-30 of 44 in total

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