ggKbase home page

L2_013_371G1_scaffold_234

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_234_1
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(248..646)
DNA (399bp) protein (133aa)
Uncharacterized protein n=9 Tax=root RepID=A6KXU6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS14963.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L2_013_371G1_scaffold_234_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(676..1326)
DNA (651bp) protein (217aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KXU5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98069.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_013_371G1_scaffold_234_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1385..2542)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6KXU4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98070.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_013_371G1_scaffold_234_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2571..3545)
DNA (975bp) protein (325aa)
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
D-alanine--D-alanine ligase n=8 Tax=root RepID=DDL_BACV8
L2_013_371G1_scaffold_234_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3542..4615)
DNA (1074bp) protein (358aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Pseudouridine synthase n=7 Tax=Bacteroides RepID=A6KXU2_BACV8
ribosomal large subunit pseudouridine synthase D
L2_013_371G1_scaffold_234_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4634..5275)
DNA (642bp) protein (214aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6KXU1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98073.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_013_371G1_scaffold_234_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5425..6771
DNA (1347bp) protein (449aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6Z3Q6_9BACE
integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KDS24439.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_013_371G1_scaffold_234_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6871..7116)
DNA (246bp) protein (82aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z3Q5_9BACE
RNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY77943.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_013_371G1_scaffold_234_9
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7382..11128)
DNA (3747bp) protein (1249aa)
Response regulator receiver domain protein n=4 Tax=root RepID=C6Z3Q4_9BACE
Sensor protein {ECO:0000313|EMBL:EFV68672.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
two-component system sensor histidine kinase/response regulator, hybrid
L2_013_371G1_scaffold_234_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11264..12649)
DNA (1386bp) protein (462aa)
Putative xylanase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXT7_BACV8
xylanase
Putative xylanase {ECO:0000313|EMBL:ABR38251.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_013_371G1_scaffold_234_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12663..12797
DNA (135bp) protein (45aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=G1UM37_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18808.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_013_371G1_scaffold_234_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12931..16152
DNA (3222bp) protein (1074aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXT6_BACV8
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR38250.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L2_013_371G1_scaffold_234_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16182..18017
DNA (1836bp) protein (612aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXT5_BACV8
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR38249.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L2_013_371G1_scaffold_234_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18192..19808
DNA (1617bp) protein (539aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9IVX6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY77949.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
sulfatase
L2_013_371G1_scaffold_234_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19826..22141
DNA (2316bp) protein (772aa)
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXT3_BACV8
Glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ABR38247.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
beta-N-acetylhexosaminidase
L2_013_371G1_scaffold_234_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22150..25209
DNA (3060bp) protein (1020aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Glycoside hydrolase family 2, candidate beta-glycosidase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXT2_BACV8
beta-glycosidase
L2_013_371G1_scaffold_234_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25227..27086
DNA (1860bp) protein (620aa)
Glycoside hydrolase family 29, candidate alpha-L-fucosidase n=2 Tax=Bacteroides vulgatus RepID=A6KXT1_BACV8
F5/8 type C domain protein {ECO:0000313|EMBL:KDS24467.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
alpha-L-fucosidase
L2_013_371G1_scaffold_234_18
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27333..29729
DNA (2397bp) protein (799aa)
Uncharacterized protein n=4 Tax=root RepID=C6Z3P6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET15505.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_013_371G1_scaffold_234_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30058..30834
DNA (777bp) protein (259aa)
Acid phosphatase {ECO:0000256|PIRNR:PIRNR000897}; EC=3.1.3.2 {ECO:0000256|PIRNR:PIRNR000897};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Acid phosphatase n=6 Tax=Bacteroides RepID=A6KXS9_BACV8
acid phosphatase
L2_013_371G1_scaffold_234_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30867..31058)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H210_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOR98087.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_013_371G1_scaffold_234_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31073..32218
DNA (1146bp) protein (382aa)
Putative polyphosphate-selective porin O n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXS8_BACV8
polyphosphate-selective porin O
Putative polyphosphate-selective porin O {ECO:0000313|EMBL:ABR38242.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_013_371G1_scaffold_234_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32412..33647
DNA (1236bp) protein (412aa)
Transcriptional regulator n=2 Tax=Bacteroides vulgatus RepID=A6KXS7_BACV8
anaerobic sulfatase-maturase
Transcriptional regulator {ECO:0000313|EMBL:ABR38241.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_013_371G1_scaffold_234_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(33826..33981)
DNA (156bp) protein (52aa)
50S ribosomal protein L34 n=18 Tax=root RepID=RL34_BACV8
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_013_371G1_scaffold_234_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34184..34750
DNA (567bp) protein (189aa)
Elongation factor P n=8 Tax=Bacteroides RepID=EFP_BACV8
elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_013_371G1_scaffold_234_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34852..35841
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9IVY4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY77959.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
glycosyl transferase family protein
L2_013_371G1_scaffold_234_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35915..36604
DNA (690bp) protein (230aa)
Putative DNA repair protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXS3_BACV8
DNA repair protein
Putative DNA repair protein {ECO:0000313|EMBL:ABR38237.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_013_371G1_scaffold_234_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36641..36961
DNA (321bp) protein (107aa)
Uncharacterized protein n=17 Tax=root RepID=A6KXS2_BACV8
hypothetical protein
FeS assembly SUF system protein {ECO:0000313|EMBL:EOR98094.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_013_371G1_scaffold_234_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37093..37860
DNA (768bp) protein (256aa)
UDP-2,3-diacylglucosamine hydrolase n=8 Tax=root RepID=A6KXS1_BACV8
UDP-2,3-diacylglucosamine hydrolase
Calcineurin-like phosphoesterase superfamily domain protein {ECO:0000313|EMBL:KDS24419.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_013_371G1_scaffold_234_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37926..39122)
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Acetate kinase n=5 Tax=Bacteroides RepID=ACKA_BACV8
acetate kinase
L2_013_371G1_scaffold_234_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39148..40161)
DNA (1014bp) protein (338aa)
Phosphate acetyltransferase n=7 Tax=Bacteroides RepID=A6KXR9_BACV8
phosphate acetyltransferase
Phosphate acetyltransferase {ECO:0000313|EMBL:EIY77964.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Displaying items 1-30 of 40 in total

View Taxonomy