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L2_013_371G1_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_244_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

115..1350
DNA (1236bp) protein (412aa)
Transposase n=7 Tax=Clostridium RepID=E9SV29_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03093.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
transposase IS116/IS110/IS902 family protein
L2_013_371G1_scaffold_244_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2153..2875
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6P1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF08038.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
LytTR family transcriptional regulator
L2_013_371G1_scaffold_244_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2872..5262
DNA (2391bp) protein (797aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF08037.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative bacteriophage Pf1 coat protein A
L2_013_371G1_scaffold_244_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5477..7168
DNA (1692bp) protein (564aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF08036.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ATP-binding region ATPase domain-containing protein
L2_013_371G1_scaffold_244_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7256..8068)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GQM4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93071.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted amidohydrolase
L2_013_371G1_scaffold_244_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8206..9492)
DNA (1287bp) protein (429aa)
TRAP transporter, DctM subunit n=4 Tax=Clostridium RepID=E9SP30_CLOSY
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ERI78973.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L2_013_371G1_scaffold_244_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9489..9965)
DNA (477bp) protein (159aa)
TRAP transporter, DctQ-like membrane protein n=3 Tax=Clostridium symbiosum RepID=E9SP29_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93069.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L2_013_371G1_scaffold_244_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9987..11051)
DNA (1065bp) protein (355aa)
TRAP transporter solute receptor, DctP family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C382_CLOSY
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:ERI78975.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
C4-dicarboxylate ABC transporter, substrate-binding protein
L2_013_371G1_scaffold_244_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11083..11817)
DNA (735bp) protein (245aa)
Creatininase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DH84_CLOSY
Creatininase {ECO:0000313|EMBL:ERI78976.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L2_013_371G1_scaffold_244_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12239..14062)
DNA (1824bp) protein (608aa)
Sigma-54 interaction domain protein n=2 Tax=Clostridium symbiosum RepID=U2C4K3_CLOSY
Sigma-54 interaction domain protein {ECO:0000313|EMBL:ERI78978.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
L2_013_371G1_scaffold_244_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14415..15632
DNA (1218bp) protein (406aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=3 Tax=Clostridium RepID=E7GQL8_CLOSY
L2_013_371G1_scaffold_244_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16014..17165
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6N1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF08028.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_013_371G1_scaffold_244_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17205..18263
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DH89_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI78981.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L2_013_371G1_scaffold_244_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18289..18753
DNA (465bp) protein (155aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SP22_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93062.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_013_371G1_scaffold_244_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18769..20268
DNA (1500bp) protein (500aa)
Membrane protein n=2 Tax=Clostridium RepID=E9SP21_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF08025.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
tripartite tricarboxylate transporter family protein
L2_013_371G1_scaffold_244_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20383..20607)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6M7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF08024.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
transcriptional regulator, XRE family
L2_013_371G1_scaffold_244_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20604..20921)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SP19_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF08023.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_013_371G1_scaffold_244_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21548..22051
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C4E0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI78918.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L2_013_371G1_scaffold_244_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22195..22470)
DNA (276bp) protein (92aa)
Membrane protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SP16_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93056.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_013_371G1_scaffold_244_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22496..22699)
DNA (204bp) protein (68aa)
Addiction module toxin, RelE/StbE family n=2 Tax=Clostridium RepID=U2DBS6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07986.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_013_371G1_scaffold_244_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22696..22974)
DNA (279bp) protein (93aa)
Addiction module antitoxin, RelB/DinJ family n=3 Tax=Clostridium RepID=E9SP14_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07985.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein
L2_013_371G1_scaffold_244_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23169..24461)
DNA (1293bp) protein (431aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
GMP synthase (Glutamine-hydrolyzing) domain protein n=3 Tax=Clostridium RepID=E9SP13_CLOSY
GMP synthase
L2_013_371G1_scaffold_244_23
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24507..25046)
DNA (540bp) protein (180aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=E9SP12_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07983.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
acetyltransferase
L2_013_371G1_scaffold_244_24
unknown

Not on your lists

comp(25320..25415)
DNA (96bp) protein (32aa)

This feature has no annotations

L2_013_371G1_scaffold_244_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25372..25824)
DNA (453bp) protein (151aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
def1; peptide deformylase Def (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6I5_9CLOT
L2_013_371G1_scaffold_244_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25799..26059)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQK0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93047.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative transcriptional regulator
L2_013_371G1_scaffold_244_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26513..27460
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6I3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07980.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Domain of unknown function (DUF1848).
L2_013_371G1_scaffold_244_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27665..28324)
DNA (660bp) protein (220aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridium RepID=E9SP09_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07979.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
transcriptional regulator
L2_013_371G1_scaffold_244_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28726..29544
DNA (819bp) protein (273aa)
AP endonuclease, family 2 n=3 Tax=Clostridium RepID=E9SP08_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93044.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
IolE; sugar phosphate isomerase
L2_013_371G1_scaffold_244_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29576..30325
DNA (750bp) protein (250aa)
fabG; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6I0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07977.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Displaying items 1-30 of 44 in total

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