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L2_013_371G1_scaffold_246

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_246_1
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(249..2723)
DNA (2475bp) protein (825aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BSQ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67133.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_246_2
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2735..5188)
DNA (2454bp) protein (818aa)
Glycoside hydrolase family 43 n=1 Tax=Prevotella copri CAG:164 RepID=R6CPH1_9BACT
Glycoside hydrolase family 43 {ECO:0000313|EMBL:CDA67132.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
glycoside hydrolase
L2_013_371G1_scaffold_246_3
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5211..7196)
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C6T0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67131.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
glycoside hydrolase
L2_013_371G1_scaffold_246_4
unknown

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comp(7193..7384)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_013_371G1_scaffold_246_5
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7475..10375
DNA (2901bp) protein (967aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BV57_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67130.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_246_6
Bacteroides sp. CAG:661, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10605..13889
DNA (3285bp) protein (1095aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5S310_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ47423.1}; TaxID=1262746 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:661.;"
TonB-linked outer membrane protein, SusC/RagA family
L2_013_371G1_scaffold_246_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13903..15954
DNA (2052bp) protein (684aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:598 RepID=R5CEU9_9BACE
Starch-binding protein {ECO:0000313|EMBL:KER50256.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
lipoprotein
L2_013_371G1_scaffold_246_8

Not on your lists

comp(16062..16268)
DNA (207bp) protein (69aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SNA7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC62057.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_013_371G1_scaffold_246_9
unknown

Not on your lists

16356..16463
DNA (108bp) protein (36aa)

This feature has no annotations

L2_013_371G1_scaffold_246_10

Not on your lists

comp(17272..17544)
DNA (273bp) protein (91aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SNA7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC62057.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_013_371G1_scaffold_246_11
Prevotella dentalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17694..19052
DNA (1359bp) protein (453aa)
Uncharacterized protein n=2 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=F9D477_PREDD
Uncharacterized protein {ECO:0000313|EMBL:EGQ14120.1}; TaxID=908937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC; 12043 / ES 2772) (Mitsuokella dentalis).;"
hypothetical protein
L2_013_371G1_scaffold_246_12
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19122..21269
DNA (2148bp) protein (716aa)
Xaa-Pro dipeptidyl-peptidase n=1 Tax=Prevotella copri CAG:164 RepID=R6CLS2_9BACT
Xaa-Pro dipeptidyl-peptidase {ECO:0000313|EMBL:CDA66232.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
peptidase
L2_013_371G1_scaffold_246_13
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21475..25563
DNA (4089bp) protein (1363aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PB74_9BACT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFB36031.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
sensor histidine kinase/DNA-binding response regulator
L2_013_371G1_scaffold_246_14
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25652..27631)
DNA (1980bp) protein (660aa)
Oligopeptide transporter, OPT family n=2 Tax=root RepID=D1PB75_9BACT
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:EFB36032.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
putative transmembrane oligopeptide transporter
L2_013_371G1_scaffold_246_15
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27631..28503)
DNA (873bp) protein (291aa)
Aldose epimerase family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BSK9_9BACT
Aldose epimerase family protein {ECO:0000313|EMBL:CDA66235.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_246_16
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28733..29614
DNA (882bp) protein (294aa)
Putative membrane protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C457_9BACT
Putative membrane protein {ECO:0000313|EMBL:CDA66236.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
membrane protein
L2_013_371G1_scaffold_246_17
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29800..30711)
DNA (912bp) protein (304aa)
Transcriptional regulator HTH_1 family n=2 Tax=root RepID=R6CLS8_9BACT
Transcriptional regulator HTH_1 family {ECO:0000313|EMBL:CDA66237.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
LysR family transcriptional regulator
L2_013_371G1_scaffold_246_18
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30890..32341)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BQ32_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA66238.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_246_19
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32348..34036)
DNA (1689bp) protein (563aa)
TrkA C-terminal domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PB81_9BACT
TrkA C-terminal domain protein {ECO:0000313|EMBL:EFB36038.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
transporter
L2_013_371G1_scaffold_246_20
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34309..35391
DNA (1083bp) protein (361aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase {ECO:0000313|EMBL:EFB36039.1}; EC=2.1.1.61 {ECO:0000313|EMBL:EFB36039.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PB82_9BACT
L2_013_371G1_scaffold_246_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35468..35956)
DNA (489bp) protein (163aa)
Phosphotyrosine protein phosphatase n=1 Tax=Prevotella copri CAG:164 RepID=R6C4F4_9BACT
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDA66341.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_246_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36000..36452)
DNA (453bp) protein (151aa)
Putative membrane protein n=1 Tax=Prevotella copri CAG:164 RepID=R6CM43_9BACT
Putative membrane protein {ECO:0000313|EMBL:CDA66342.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_246_23
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36578..37183)
DNA (606bp) protein (202aa)
Secretion protein HlyD family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BQE6_9BACT
Secretion protein HlyD family protein {ECO:0000313|EMBL:CDA66343.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
secretion protein HlyD family protein
L2_013_371G1_scaffold_246_24
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37339..38265)
DNA (927bp) protein (309aa)
Outer membrane efflux protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BZ88_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:CDA66344.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
outer membrane efflux protein
L2_013_371G1_scaffold_246_25
unknown

Not on your lists

38309..38443
DNA (135bp) protein (45aa)

This feature has no annotations

L2_013_371G1_scaffold_246_26
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38453..39328
DNA (876bp) protein (292aa)
Transcriptional regulator AraC family n=1 Tax=Prevotella copri CAG:164 RepID=R6BSX2_9BACT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDA66345.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
transcriptional regulator
L2_013_371G1_scaffold_246_27
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39362..41224
DNA (1863bp) protein (621aa)
Potassium uptake protein Trk family n=1 Tax=Prevotella copri CAG:164 RepID=R6C4F9_9BACT
Potassium uptake protein Trk family {ECO:0000313|EMBL:CDA66346.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Di-and tricarboxylate transporters
Displaying 27 items

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