ggKbase home page

L2_013_371G1_scaffold_285

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_285_1
unknown

Not on your lists

comp(70..222)
DNA (153bp) protein (51aa)

This feature has no annotations

L2_013_371G1_scaffold_285_2
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(342..797)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KLF0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE77205.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L2_013_371G1_scaffold_285_3
unknown

Not on your lists

comp(906..1436)
DNA (531bp) protein (177aa)

This feature has no annotations

L2_013_371G1_scaffold_285_4
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1835..1987)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFL9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34592.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L2_013_371G1_scaffold_285_5
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2030..2446)
DNA (417bp) protein (139aa)
PIN domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFM0_9BACT
PIN domain protein {ECO:0000313|EMBL:EFB34593.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
PilT protein domain-containing protein
L2_013_371G1_scaffold_285_6
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2446..2694)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFM1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34594.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L2_013_371G1_scaffold_285_7
unknown

Not on your lists

comp(2954..3121)
DNA (168bp) protein (56aa)

This feature has no annotations

L2_013_371G1_scaffold_285_8
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3140..3508)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFM2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34595.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_371G1_scaffold_285_9
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3486..4553)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGE9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34246.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_371G1_scaffold_285_10
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4564..4815)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGE8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34245.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_371G1_scaffold_285_11
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4939..5385)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGE7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34244.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_371G1_scaffold_285_12
Prevotella sp. CAG:1092, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5609..6190
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1092 RepID=R5P5S4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ11870.1}; TaxID=1262919 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1092.;"
hypothetical protein
L2_013_371G1_scaffold_285_13
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6277..6399
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:604 RepID=R6BFF3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA57836.1}; TaxID=1262932 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
L2_013_371G1_scaffold_285_14
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6458..6889
DNA (432bp) protein (144aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PI19_9BACT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EFB33656.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
N-acetylmuramoyl-L-alanine amidase
L2_013_371G1_scaffold_285_15
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6960..7505)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGE5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB34242.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
transcriptional regulator
L2_013_371G1_scaffold_285_16
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7996..8952)
DNA (957bp) protein (319aa)
Site-specific recombinase, phage integrase family n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGE4_9BACT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFB34241.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
integrase
L2_013_371G1_scaffold_285_17
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9512..11743)
DNA (2232bp) protein (744aa)
Phospholipase, patatin family n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGE0_9BACT
Phospholipase, patatin family {ECO:0000313|EMBL:EFB34237.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
Patatin
L2_013_371G1_scaffold_285_18
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12026..12250
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YYI4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN19417.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein
L2_013_371G1_scaffold_285_19
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12258..12683
DNA (426bp) protein (142aa)
Putative toxin-antitoxin system toxin component, PIN family n=2 Tax=Bacteroides RepID=B3JNF0_9BACE
Nucleotide-binding protein {ECO:0000313|EMBL:ETK07651.1}; TaxID=1411021 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 6/7/9.;"
PIN domain-containing protein
L2_013_371G1_scaffold_285_20

Not on your lists

13020..13388
DNA (369bp) protein (123aa)
Membrane protein containing DUF486 n=1 Tax=human gut metagenome RepID=K1TTA5_9ZZZZ
Membrane protein containing DUF486 {ECO:0000313|EMBL:EKC73018.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_013_371G1_scaffold_285_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13452..14339)
DNA (888bp) protein (296aa)
Metallo-beta-lactamase family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6CQ89_9BACT
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CDA67392.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
metallo-beta-lactamase domain protein
L2_013_371G1_scaffold_285_22
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14369..14824
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PH99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB33862.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
L2_013_371G1_scaffold_285_23
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14928..17108)
DNA (2181bp) protein (727aa)
Outer membrane protein OMP85 family n=2 Tax=root RepID=R6C2D0_9BACT
Outer membrane protein OMP85 family {ECO:0000313|EMBL:CDA67394.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
outer membrane protein/protective antigen OMA87
L2_013_371G1_scaffold_285_24
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17234..17983
DNA (750bp) protein (250aa)
RNA methyltransferase, TrmH family n=2 Tax=root RepID=D1PHA3_9BACT
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFB33866.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
tRNA/rRNA methyltransferase
L2_013_371G1_scaffold_285_25
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18050..18727
DNA (678bp) protein (226aa)
PTS system beta-glucoside-specific IIABC component n=1 Tax=Prevotella copri CAG:164 RepID=R6C7J6_9BACT
PTS system beta-glucoside-specific IIABC component {ECO:0000313|EMBL:CDA67396.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_285_26
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18751..19827
DNA (1077bp) protein (359aa)
Histidinol-phosphatase n=2 Tax=Prevotella RepID=D1PHA5_9BACT
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
histidinol-phosphatase
L2_013_371G1_scaffold_285_27
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19904..20965)
DNA (1062bp) protein (354aa)
Phosphate-selective porin O and P family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BTF3_9BACT
Phosphate-selective porin O and P family protein {ECO:0000313|EMBL:CDA67398.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Phosphate-selective porin O and P.
L2_013_371G1_scaffold_285_28
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21277..22005
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=root RepID=R6C2D4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67399.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_285_29
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22124..24148
DNA (2025bp) protein (675aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Polyphosphate kinase n=3 Tax=root RepID=R6BVY4_9BACT
polyphosphate kinase
L2_013_371G1_scaffold_285_30
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24164..25069
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6C7K2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA67401.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
phosphatase
Displaying items 1-30 of 42 in total

View Taxonomy