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L2_013_371G1_scaffold_298

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_298_1

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283..3423
DNA (3141bp) protein (1047aa)
TonB-dependent receptor plug domain protein n=1 Tax=gut metagenome RepID=J9GM83_9ZZZZ
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EJX09052.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
SusC/RagA family TonB-linked outer membrane protein
L2_013_371G1_scaffold_298_2

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3457..5466
DNA (2010bp) protein (670aa)
Outer membrane protein probably involved in nutrient binding protein n=1 Tax=gut metagenome RepID=J9D8E6_9ZZZZ
Outer membrane protein probably involved in nutrient binding protein {ECO:0000313|EMBL:EJX09051.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L2_013_371G1_scaffold_298_3
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5834..7186
DNA (1353bp) protein (451aa)
ATPase (AAA+ superfamily) n=1 Tax=Prevotella sp. CAG:386 RepID=R6Q1X7_9BACT
ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CDC24716.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:386.;"
hypothetical protein
L2_013_371G1_scaffold_298_4
unknown

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7201..7374
DNA (174bp) protein (58aa)

This feature has no annotations

L2_013_371G1_scaffold_298_5
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7322..8221)
DNA (900bp) protein (300aa)
Diaminopimelate dehydrogenase n=3 Tax=root RepID=D1PHI9_9BACT
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:CDA65594.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
diaminopimelate dehydrogenase
L2_013_371G1_scaffold_298_6
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8682..9296
DNA (615bp) protein (205aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ruvA; Holliday junction DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHI8_9BACT
L2_013_371G1_scaffold_298_7
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9315..16853
DNA (7539bp) protein (2513aa)
Gliding motility-related protein n=4 Tax=root RepID=R6CJZ4_9BACT
Gliding motility-related protein {ECO:0000313|EMBL:CDA65597.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_298_8
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16796..16945)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BN87_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA65598.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
L2_013_371G1_scaffold_298_9
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16978..18567)
DNA (1590bp) protein (530aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
nadB; L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=2 Tax=root RepID=D1PHI6_9BACT
L2_013_371G1_scaffold_298_10

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18801..19205
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1V4G9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC78796.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Protein of unknown function (DUF1200)
L2_013_371G1_scaffold_298_11
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19254..20516
DNA (1263bp) protein (421aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=root RepID=R6C2C0_9BACT
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:CDA65601.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
L2_013_371G1_scaffold_298_12
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20555..21808
DNA (1254bp) protein (418aa)
MscS Mechanosensitive ion channel n=1 Tax=Prevotella copri CAG:164 RepID=R6CJZ8_9BACT
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDA65602.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
small-conductance mechanosensitive channel
L2_013_371G1_scaffold_298_13
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21844..22884
DNA (1041bp) protein (347aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EFB33834.1}; EC=3.2.2.- {ECO:0000313|EMBL:EFB33834.1};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHI2_9BACT
L2_013_371G1_scaffold_298_14
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(22966..23508)
DNA (543bp) protein (181aa)
Rubrerythrin n=1 Tax=Prevotella copri CAG:164 RepID=R6BX78_9BACT
Rubrerythrin {ECO:0000313|EMBL:CDA65604.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
rbr; rubrerythrin
L2_013_371G1_scaffold_298_15
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23601..25217)
DNA (1617bp) protein (539aa)
Na+/H+ antiporter family protein n=1 Tax=Prevotella copri CAG:164 RepID=R6BQU4_9BACT
Na+/H+ antiporter family protein {ECO:0000313|EMBL:CDA65605.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Na+/H+ antiporter NhaC
L2_013_371G1_scaffold_298_16
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25270..25449
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHH8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB33830.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
L2_013_371G1_scaffold_298_17
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25452..26159
DNA (708bp) protein (236aa)
Putative periplasmic protein n=3 Tax=root RepID=R6C2C5_9BACT
Putative periplasmic protein {ECO:0000313|EMBL:CDA65606.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
hypothetical protein
L2_013_371G1_scaffold_298_18
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26265..26747
DNA (483bp) protein (161aa)
Thioredoxin n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHH7_9BACT
Thioredoxin {ECO:0000313|EMBL:EFB33829.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
thioredoxin
L2_013_371G1_scaffold_298_19
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26912..28219
DNA (1308bp) protein (436aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
Enolase n=2 Tax=root RepID=R6CK01_9BACT
phosphopyruvate hydratase
L2_013_371G1_scaffold_298_20
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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28408..29154
DNA (747bp) protein (249aa)
Zinc/iron permease n=1 Tax=Prevotella copri CAG:164 RepID=R6BN95_9BACT
Zinc/iron permease {ECO:0000313|EMBL:CDA65608.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
zinc/iron permease
L2_013_371G1_scaffold_298_21
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(29396..31585)
DNA (2190bp) protein (730aa)
Glutamine synthetase type III n=1 Tax=Prevotella copri CAG:164 RepID=R6C6S5_9BACT
Glutamine synthetase type III {ECO:0000313|EMBL:CDA67126.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
glutamine synthetase
L2_013_371G1_scaffold_298_22
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(31642..32874)
DNA (1233bp) protein (411aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
LL-diaminopimelate aminotransferase n=2 Tax=root RepID=R6CPG4_9BACT
aminotransferase-like protein
L2_013_371G1_scaffold_298_23
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(32937..33776)
DNA (840bp) protein (280aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PHW6_9BACT
L2_013_371G1_scaffold_298_24
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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34231..34587
DNA (357bp) protein (119aa)
Nitrogen regulatory protein P-II n=2 Tax=Prevotella RepID=D1PHW8_9BACT
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EFB33694.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
nitrogen regulatory protein P-II
L2_013_371G1_scaffold_298_25
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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34689..35957
DNA (1269bp) protein (423aa)
Ammonium transporter n=1 Tax=Prevotella copri CAG:164 RepID=R6C772_9BACT
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
ammonium transporter
L2_013_371G1_scaffold_298_26
Prevotella maculosa, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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36672..37349
DNA (678bp) protein (226aa)
CRISPR-associated endoribonuclease cas6 n=1 Tax=Prevotella maculosa OT 289 RepID=H1HNK0_9BACT
CRISPR-associated endoribonuclease {ECO:0000256|PIRNR:PIRNR005054}; TaxID=999422 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella maculosa OT 289.;"
cas6; CRISPR-associated endoribonuclease Cas6
L2_013_371G1_scaffold_298_27
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

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37346..39406
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Bacteroidetes bacterium oral taxon 272 str. F0290 RepID=S8FIA6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPT33603.1}; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;"
L2_013_371G1_scaffold_298_28
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

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39411..40352
DNA (942bp) protein (314aa)
PF05107 family n=1 Tax=Bacteroidetes bacterium oral taxon 272 str. F0290 RepID=S8FFC4_9BACT
PF05107 family {ECO:0000313|EMBL:EPT33657.1}; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;"
hypothetical protein
L2_013_371G1_scaffold_298_29
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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40349..41059
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002E88C77
CRISPR-associated protein Cas5, Hmari subtype
Tax=GWF2_Bacteroidetes_35_48_curated
L2_013_371G1_scaffold_298_30
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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41044..43461
DNA (2418bp) protein (806aa)
CRISPR-associated helicase Cas3 n=1 Tax=Bacteroidetes bacterium oral taxon 272 str. F0290 RepID=S8FIF8_9BACT
helicase
Tax=GWF2_Bacteroidetes_35_48_curated
Displaying items 1-30 of 34 in total

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