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L2_013_371G1_scaffold_334

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_334_1

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207..620
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0D5_BIFAA
Putative OsmC-like protein
Uncharacterized protein {ECO:0000313|EMBL:CDX10507.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L2_013_371G1_scaffold_334_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(725..1759)
DNA (1035bp) protein (345aa)
Universal stress family protein n=2 Tax=Bifidobacterium RepID=A7A496_BIFAD
universal stress family protein
Universal stress family protein {ECO:0000313|EMBL:AII75818.1}; Universal stress protein {ECO:0000313|EMBL:KIM02236.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_371G1_scaffold_334_3
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1921..2670)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GN01_9BIFI
hypothetical protein
Invasion-associated cell wall-associated hydrolase {ECO:0000313|EMBL:KFI96563.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_013_371G1_scaffold_334_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2733..3665)
DNA (933bp) protein (311aa)
CHAP domain protein n=2 Tax=Bifidobacterium RepID=A7A494_BIFAD
hypothetical protein
Amidase {ECO:0000313|EMBL:KIM02238.1}; CHAP domain containing protein {ECO:0000313|EMBL:AII75816.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05387.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_371G1_scaffold_334_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3872..5014
DNA (1143bp) protein (381aa)
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Probable phosphoserine aminotransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0D1_BIFAA
L2_013_371G1_scaffold_334_6
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5041..5295
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0D0_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI96560.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_013_371G1_scaffold_334_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5416..6606)
DNA (1191bp) protein (397aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Sensor protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0C9_BIFAA
sensor protein
L2_013_371G1_scaffold_334_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6788..7468
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Bifidobacterium RepID=A7A490_BIFAD
response regulator of two-component system
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_371G1_scaffold_334_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7789..9669
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GS76_9BIFI
Myosin-cross-reactive antigen {ECO:0000313|EMBL:AII75811.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
myosin-cross-reactive antigen
L2_013_371G1_scaffold_334_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9896..10636)
DNA (741bp) protein (247aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=4 Tax=Bifidobacterium RepID=A1A0C6_BIFAA
gpmA; phosphoglyceromutase
L2_013_371G1_scaffold_334_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10740..11813)
DNA (1074bp) protein (358aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0C5_BIFAA
putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase
L2_013_371G1_scaffold_334_12
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11997..13676)
DNA (1680bp) protein (560aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0X7_9BIFI
L2_013_371G1_scaffold_334_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14007..15161
DNA (1155bp) protein (385aa)
AraJ-like protein probably involved in transport of arabinose polymers n=2 Tax=Bifidobacterium RepID=A1A0C3_BIFAA
AraJ-like protein
AraJ-like protein probably involved in transport of arabinose polymers {ECO:0000313|EMBL:BAF39156.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_013_371G1_scaffold_334_14
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15527..17344
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GS81_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18599.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
putative membrane protein possibly involved in transport
L2_013_371G1_scaffold_334_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17303..17917)
DNA (615bp) protein (205aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0C1_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05375.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_371G1_scaffold_334_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17914..19749)
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0C0_BIFAA
Uncharacterized protein {ECO:0000313|EMBL:BAF39153.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
hypothetical protein
L2_013_371G1_scaffold_334_17
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19941..21440
DNA (1500bp) protein (500aa)
PspC domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5Z7_9BIFI
Histidine kinase sensor of two component system {ECO:0000313|EMBL:KFI96549.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
histidine kinase sensor of two component system
L2_013_371G1_scaffold_334_18
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21494..22174
DNA (681bp) protein (227aa)
Response regulator of two-component system n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GRZ7_9BIFI
response regulator of two-component system
Response regulator of two-component system {ECO:0000313|EMBL:CCY20190.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_013_371G1_scaffold_334_19
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22574..23860)
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Serine--tRNA ligase n=2 Tax=Bifidobacterium RepID=SYS_BIFAA
L2_013_371G1_scaffold_334_20
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23994..25181
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A0B6_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20188.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_013_371G1_scaffold_334_21
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25236..26084)
DNA (849bp) protein (283aa)
Transcription antiterminator similar to LicT n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5Z3_9BIFI
Transcription antiterminator similar to LicT {ECO:0000313|EMBL:CCY20186.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
transcription antiterminator LicT
L2_013_371G1_scaffold_334_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26116..28206)
DNA (2091bp) protein (697aa)
Phosphotransferase system, EIIC n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A473_BIFAD
Glucose-specific II BC component {ECO:0000313|EMBL:AJE05368.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
glucose-specific II BC component
L2_013_371G1_scaffold_334_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28548..30203
DNA (1656bp) protein (552aa)
Phosphoglucomutase alpha-D-glucose phosphate-specific n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPV0_9BIFI
Phosphoglucomutase {ECO:0000313|EMBL:AJE05367.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
phosphoglucomutase
L2_013_371G1_scaffold_334_24
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30420..31235
DNA (816bp) protein (272aa)
Response regulator receiver domain protein n=2 Tax=Bifidobacterium RepID=A7A468_BIFAD
Response regulator receiver domain protein {ECO:0000313|EMBL:CCY19438.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
two-component response regulator
L2_013_371G1_scaffold_334_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31237..32625
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0B1_BIFAA
two-component sensor histidine kinase
Two-component sensor histidine kinase {ECO:0000313|EMBL:AII75795.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_013_371G1_scaffold_334_26
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32695..34050
DNA (1356bp) protein (452aa)
Ribonuclease H n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPU5_9BIFI
Ribonuclease H {ECO:0000313|EMBL:CCY19435.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
ribonuclease H
L2_013_371G1_scaffold_334_27
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34272..34871
DNA (600bp) protein (200aa)
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Ribose-5-phosphate isomerase A n=3 Tax=Bifidobacterium RepID=RPIA_BIFAA
Displaying 27 items

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