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L2_013_371G1_scaffold_349

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_349_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(293..739)
DNA (447bp) protein (149aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3H0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05499.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_013_371G1_scaffold_349_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(751..1128)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z641_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET16350.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_013_371G1_scaffold_349_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1173..1724)
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=5 Tax=Bacteroides RepID=C6Z642_9BACE
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFV66645.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
RNA polymerase sigma70 factor
L2_013_371G1_scaffold_349_4
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1758..2585)
DNA (828bp) protein (276aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
Ribonuclease Z n=14 Tax=root RepID=B6W2P0_9BACE
ribonuclease Z
L2_013_371G1_scaffold_349_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2758..3204)
DNA (447bp) protein (149aa)
Cold-shock DNA-binding domain protein n=7 Tax=Bacteroides RepID=C6Z644_9BACE
cold shock protein, DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05503.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_013_371G1_scaffold_349_6
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3454..5250)
DNA (1797bp) protein (599aa)
30S ribosomal protein S1 n=6 Tax=Bacteroides RepID=A6L3H5_BACV8
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:AII62724.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L2_013_371G1_scaffold_349_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5284..5421)
DNA (138bp) protein (46aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UML6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82596.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_013_371G1_scaffold_349_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5447..7111
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A4D1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82595.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
putative two-component system sensor kinase/response regulator fusion protein
L2_013_371G1_scaffold_349_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7108..7809)
DNA (702bp) protein (234aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3H6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82594.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_013_371G1_scaffold_349_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7813..8649)
DNA (837bp) protein (279aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
N-acetylmuramic acid 6-phosphate etherase n=4 Tax=Bacteroides RepID=C6Z648_9BACE
murQ; N-acetylmuramic acid 6-phosphate etherase
L2_013_371G1_scaffold_349_11
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8646..9485)
DNA (840bp) protein (280aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z649_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET16358.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_013_371G1_scaffold_349_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9641..10426)
DNA (786bp) protein (262aa)
Two-component system response regulator n=3 Tax=Bacteroides RepID=A6L3H9_BACV8
two-component system response regulator
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EET16359.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_013_371G1_scaffold_349_13
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10419..11462)
DNA (1044bp) protein (348aa)
Histidine kinase n=7 Tax=Bacteroides RepID=C6Z651_9BACE
Histidine kinase {ECO:0000313|EMBL:EET16360.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
two-component system sensor kinase
L2_013_371G1_scaffold_349_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11579..12217)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UJU3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82588.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_013_371G1_scaffold_349_15
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12230..12862)
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L3I2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66656.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_013_371G1_scaffold_349_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12888..13445)
DNA (558bp) protein (186aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L3I3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82586.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_013_371G1_scaffold_349_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13679..14233)
DNA (555bp) protein (185aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L3I4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18384.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_013_371G1_scaffold_349_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15089..16363)
DNA (1275bp) protein (425aa)
Beta-lactamase induction signal transducer n=2 Tax=Bacteroides vulgatus RepID=A6L3I6_BACV8
beta-lactamase induction signal transducer
Beta-lactamase induction signal transducer {ECO:0000313|EMBL:ABR40250.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_013_371G1_scaffold_349_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16421..17737)
DNA (1317bp) protein (439aa)
Amidase enhancer n=6 Tax=Bacteroides RepID=A6L3I7_BACV8
amidase
Amidase enhancer {ECO:0000313|EMBL:CDF18386.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_013_371G1_scaffold_349_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17794..20265)
DNA (2472bp) protein (824aa)
Uncharacterized protein n=2 Tax=root RepID=I9A5E6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82582.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
glycosyl transferase family protein
L2_013_371G1_scaffold_349_21
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20352..21146
DNA (795bp) protein (265aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
Probable dual-specificity RNA methyltransferase RlmN n=3 Tax=Bacteroides RepID=C3PZF4_9BACE
ribosomal RNA large subunit methyltransferase N
L2_013_371G1_scaffold_349_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21172..22236
DNA (1065bp) protein (355aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L3J0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56681.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_013_371G1_scaffold_349_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22263..23363
DNA (1101bp) protein (367aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=5 Tax=Bacteroides RepID=C6Z661_9BACE
4-hydroxythreonine-4-phosphate dehydrogenase
L2_013_371G1_scaffold_349_24
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23405..24115
DNA (711bp) protein (237aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L3J2_BACV8
nucleoside-diphosphate-sugar pyrophosphorylase
Uncharacterized protein {ECO:0000313|EMBL:EFV66665.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_013_371G1_scaffold_349_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24135..24986
DNA (852bp) protein (284aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L3J3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66666.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_013_371G1_scaffold_349_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24994..25944
DNA (951bp) protein (317aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z664_9BACE
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:KDS56677.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_013_371G1_scaffold_349_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25971..26942
DNA (972bp) protein (324aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I9A4B1_BACVU
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ABR40259.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_013_371G1_scaffold_349_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26947..27669
DNA (723bp) protein (241aa)
HAD hydrolase, family IA, variant 3 n=5 Tax=root RepID=C6Z666_9BACE
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:KDS56675.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
HAD family hydrolase
L2_013_371G1_scaffold_349_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27676..28875
DNA (1200bp) protein (400aa)
Fucose permease n=7 Tax=Bacteroides RepID=A6L3J7_BACV8
fucose permease
H+ symporter permease {ECO:0000313|EMBL:KDS56674.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_013_371G1_scaffold_349_30
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28929..29825)
DNA (897bp) protein (299aa)
Kinase, PfkB family n=5 Tax=Bacteroides RepID=C6Z668_9BACE
ribokinase
Ribokinase {ECO:0000313|EMBL:EFV66671.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Displaying items 1-30 of 58 in total

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