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L2_013_371G1_scaffold_444

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_444_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..447)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X963_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92473.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L2_013_371G1_scaffold_444_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(475..1446)
DNA (972bp) protein (324aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Pseudouridine synthase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG67_9CLOT
RluA family pseudouridine synthase
L2_013_371G1_scaffold_444_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1462..2040)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X9U8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92658.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L2_013_371G1_scaffold_444_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2108..2872)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B722_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59699.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Short-chain dehydrogenases of various substrate specificities
L2_013_371G1_scaffold_444_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2892..4787)
DNA (1896bp) protein (632aa)
UPF0313 protein CLOBOL_03961 n=4 Tax=Clostridium bolteae RepID=A8RUB4_9CLOT
UPF0313 protein CLOBOL_03961 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
radical SAM protein
L2_013_371G1_scaffold_444_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4787..5449)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59524.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
HAD-superfamily hydrolase
L2_013_371G1_scaffold_444_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5433..6176)
DNA (744bp) protein (248aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Pseudouridine synthase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG61_9CLOT
pseudouridine synthase
L2_013_371G1_scaffold_444_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6176..7528)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59522.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Fmu (Sun) domain-containing protein
L2_013_371G1_scaffold_444_9
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7578..8381)
DNA (804bp) protein (268aa)
Peptidase, M23 family n=2 Tax=Clostridium RepID=D3ALW9_9CLOT
Peptidase M23 {ECO:0000313|EMBL:KEZ89787.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
peptidase M23
L2_013_371G1_scaffold_444_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8433..9347
DNA (915bp) protein (305aa)
Sporulation integral membrane protein YlbJ n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPR8_9CLOT
Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:ENY92665.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
nucleoside recognition domain-containing protein
L2_013_371G1_scaffold_444_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9307..9888)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59518.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_371G1_scaffold_444_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9921..10397)
DNA (477bp) protein (159aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
pantetheine-phosphate adenylyltransferase, bacterial (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG55_9CLOT
L2_013_371G1_scaffold_444_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10399..10959)
DNA (561bp) protein (187aa)
RsmD family RNA methyltransferase n=4 Tax=Clostridium RepID=N9YS78_9CLOT
RsmD family RNA methyltransferase {ECO:0000313|EMBL:ENZ10617.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
methyltransferase
L2_013_371G1_scaffold_444_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11112..11318)
DNA (207bp) protein (69aa)
Small, acid-soluble spore protein, alpha/beta type n=3 Tax=Clostridium RepID=D3ALW3_9CLOT
Small, acid-soluble spore protein, alpha/beta type {ECO:0000313|EMBL:EFC97199.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
alpha/beta type small acid-soluble spore protein
L2_013_371G1_scaffold_444_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11449..12303)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGU9_9CLOT
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_371G1_scaffold_444_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12315..12656)
DNA (342bp) protein (114aa)
UPF0102 protein HMPREF9473_02728 n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGV0_9CLOT
UPF0102 protein HMPREF9473_02728 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_371G1_scaffold_444_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12673..13314)
DNA (642bp) protein (214aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Ribonuclease H (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGV1_9CLOT
L2_013_371G1_scaffold_444_18
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13299..13802)
DNA (504bp) protein (168aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JTE8_9FIRM
L2_013_371G1_scaffold_444_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13812..14666)
DNA (855bp) protein (285aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGV3_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ribosome biogenesis GTP-binding protein YlqF
L2_013_371G1_scaffold_444_20
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14688..15293)
DNA (606bp) protein (202aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Signal peptidase I n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X975_9CLOT
signal peptidase I
L2_013_371G1_scaffold_444_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15317..15664)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGV5_9CLOT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
50S ribosomal protein L19
L2_013_371G1_scaffold_444_22
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15797..16543)
DNA (747bp) protein (249aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R235_CLOSW
tRNA (guanine-N1)-methyltransferase
L2_013_371G1_scaffold_444_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16559..17068)
DNA (510bp) protein (170aa)
Ribosome maturation factor RimM n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGV7_9CLOT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
16S rRNA processing protein RimM
L2_013_371G1_scaffold_444_24
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17129..17356)
DNA (228bp) protein (76aa)
UPF0109 protein HMPREF9469_03693 n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HM81_9CLOT
UPF0109 protein CLFS41_20090 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_013_371G1_scaffold_444_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17372..17614)
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGV9_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
SSU ribosomal protein S16P
L2_013_371G1_scaffold_444_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17684..19039)
DNA (1356bp) protein (452aa)
Signal recognition particle protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGW0_9CLOT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
signal recognition particle protein
L2_013_371G1_scaffold_444_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19061..19402)
DNA (342bp) protein (114aa)
UPF0122 protein HMPREF9473_02739 n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGW1_9CLOT
UPF0122 protein HMPREF9473_02739 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
helix-turn-helix protein YlxM/p13 family protein
L2_013_371G1_scaffold_444_28
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19477..20586)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LHQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET59797.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L2_013_371G1_scaffold_444_29
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20622..21461)
DNA (840bp) protein (280aa)
Multiple sugar transport system permease n=1 Tax=Dorea sp. 5-2 RepID=R9MTI1_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EOS74098.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
binding-protein-dependent transport systems inner membrane component
L2_013_371G1_scaffold_444_30
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21473..22351)
DNA (879bp) protein (293aa)
Multiple sugar transport system permease n=1 Tax=Dorea sp. 5-2 RepID=R9N1Z6_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EOS74097.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
binding-protein-dependent transport systems inner membrane component
Displaying items 1-30 of 34 in total

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