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L2_013_371G1_scaffold_485

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_485_1
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..289)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q182_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EET84751.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
Flavodoxins
L2_013_371G1_scaffold_485_2
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(267..677)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NKQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29723.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
L2_013_371G1_scaffold_485_3
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(716..1453)
DNA (738bp) protein (246aa)
Putative flavodoxin n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAE0_9CLOT
Putative flavodoxin {ECO:0000313|EMBL:EEG31580.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Flavodoxins
L2_013_371G1_scaffold_485_4
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1450..2178)
DNA (729bp) protein (243aa)
Flavodoxin n=2 Tax=Clostridium RepID=D4CAU2_9CLOT
Flavodoxin {ECO:0000313|EMBL:CCY85637.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
flavodoxin
L2_013_371G1_scaffold_485_5
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2371..3138)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M074_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64454.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L2_013_371G1_scaffold_485_6
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3163..3696)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y9C8_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV43320.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
NADPH-dependent FMN reductase
L2_013_371G1_scaffold_485_7
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3710..4897)
DNA (1188bp) protein (396aa)
Alcohol dehydrogenase {ECO:0000313|EMBL:EHI97596.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EHI97596.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Alcohol dehydrogenase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXS9_9CLOT
hypothetical protein
L2_013_371G1_scaffold_485_8
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4923..5648)
DNA (726bp) protein (242aa)
pcaC; 4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C991_9FIRM
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:EDS72255.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
L2_013_371G1_scaffold_485_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5662..6513)
DNA (852bp) protein (284aa)
aldehyde reductase (EC:1.1.1.21)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LA72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62479.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L2_013_371G1_scaffold_485_10
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6644..7498
DNA (855bp) protein (285aa)
Transcriptional regulator, LysR family n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RIM4_ACIFV
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADB46926.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L2_013_371G1_scaffold_485_11
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7501..8331)
DNA (831bp) protein (277aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXH7_9CLOT
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEG75284.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
dehydrogenase
L2_013_371G1_scaffold_485_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8328..8756)
DNA (429bp) protein (143aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXH6_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEG75283.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative aldo-keto reductase
L2_013_371G1_scaffold_485_13
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(8772..9761)
DNA (990bp) protein (330aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BDU2_9FIRM
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) {ECO:0000313|EMBL:CDD63067.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L2_013_371G1_scaffold_485_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9832..10095)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57051.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
LysR family transcriptional regulator
L2_013_371G1_scaffold_485_15
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10472..10741)
DNA (270bp) protein (90aa)
Cupin domain protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MT02_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDC01885.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
L2_013_371G1_scaffold_485_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10755..11486)
DNA (732bp) protein (244aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TQA5_9CLOT
5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:CCZ61221.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L2_013_371G1_scaffold_485_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11595..12095)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44465.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PTS system cellobiose-specific transporter subunit IIC
L2_013_371G1_scaffold_485_18
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12082..14544)
DNA (2463bp) protein (821aa)
bgl3E; beta-glucosidase Bgl3E (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EKH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97191.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L2_013_371G1_scaffold_485_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14608..17517)
DNA (2910bp) protein (970aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57045.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L2_013_371G1_scaffold_485_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17635..18948)
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57046.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
virS; two-component sensor kinase VirS
L2_013_371G1_scaffold_485_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18948..19655)
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57047.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_371G1_scaffold_485_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20893..22272)
DNA (1380bp) protein (460aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60592.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
TrmA family RNA methyltransferase
L2_013_371G1_scaffold_485_23
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22591..22878)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B076_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56212.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_013_371G1_scaffold_485_24
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23020..25296)
DNA (2277bp) protein (759aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
UvrD/REP helicase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZ72_CLOSW
UvrD/REP helicase
L2_013_371G1_scaffold_485_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25528..25911)
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID23_9CLOT
Endoribonuclease L-PSP {ECO:0000313|EMBL:EHI60588.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
endoribonuclease L-PSP
L2_013_371G1_scaffold_485_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26119..26742
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60587.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_371G1_scaffold_485_27
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26800..27093)
DNA (294bp) protein (98aa)
TrpR family protein YerC/YecD n=2 Tax=Clostridium RepID=D3ADC6_9CLOT
TrpR protein {ECO:0000313|EMBL:CCZ61845.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
TrpR-like protein YerC/YecD
L2_013_371G1_scaffold_485_28
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27230..28036)
DNA (807bp) protein (269aa)
Cof-like hydrolase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZE3_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EEG55556.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
cof family hydrolase
L2_013_371G1_scaffold_485_29
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28216..29496
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EZZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98340.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
acyltransferase 3
L2_013_371G1_scaffold_485_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29568..30143
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60584.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Displaying items 1-30 of 41 in total

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