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L2_013_371G1_scaffold_636

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_636_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(222..1310)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76030.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, CdaR family
L2_013_371G1_scaffold_636_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1514..2386)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79829.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_013_371G1_scaffold_636_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2607..2972)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79828.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Coenzyme PQQ synthesis protein D (PqqD).
L2_013_371G1_scaffold_636_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2997..4895)
DNA (1899bp) protein (633aa)
peptide transporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000304B203
OPT family oligopeptide transporter {ECO:0000313|EMBL:EES76027.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative oligopeptide transporter, OPT family
L2_013_371G1_scaffold_636_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5073..6872)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JG47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76026.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Nitric oxide reductase activation protein
L2_013_371G1_scaffold_636_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6856..7776)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76025.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
MoxR-like ATPases
L2_013_371G1_scaffold_636_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7893..10013)
DNA (2121bp) protein (707aa)
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79821.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_371G1_scaffold_636_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10015..10965)
DNA (951bp) protein (317aa)
YegS//BmrU family lipid kinase n=2 Tax=Ruminococcus RepID=C6JG44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79819.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L2_013_371G1_scaffold_636_9
unknown

Not on your lists

11066..11212
DNA (147bp) protein (49aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00035D2E7C
L2_013_371G1_scaffold_636_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11517..12194
DNA (678bp) protein (226aa)
Cof-like hydrolase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG42_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EES76021.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_371G1_scaffold_636_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12569..13348)
DNA (780bp) protein (260aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CM19_9FIRM
L2_013_371G1_scaffold_636_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13341..14525)
DNA (1185bp) protein (395aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
tryptophan synthase, beta subunit (EC:4.2.1.20)
tryptophan synthase subunit beta n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E462C5
L2_013_371G1_scaffold_636_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14692..15318)
DNA (627bp) protein (209aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5''''-phosphoribosyl)anthranilate isomerase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F418AE
L2_013_371G1_scaffold_636_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15349..16188)
DNA (840bp) protein (280aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
indole-3-glycerol phosphate synthase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002ED5081
L2_013_371G1_scaffold_636_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16249..17259)
DNA (1011bp) protein (337aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLV0_9FIRM
L2_013_371G1_scaffold_636_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17252..17830)
DNA (579bp) protein (193aa)
anthranilate synthase, component II (EC:4.1.3.27)
anthranilate synthase subunit II n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F03A05
Uncharacterized protein {ECO:0000313|EMBL:CDD78995.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_013_371G1_scaffold_636_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17827..19314)
DNA (1488bp) protein (496aa)
anthranilate synthase, component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG35_9FIRM
Anthranilate synthase component I {ECO:0000313|EMBL:EES76014.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_636_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20174..21634)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNI3_9FIRM
Uracil-xanthine permease {ECO:0000313|EMBL:EES76013.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
uracil-xanthine permease
L2_013_371G1_scaffold_636_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22084..22425)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76012.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_013_371G1_scaffold_636_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23487..26462)
DNA (2976bp) protein (992aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76011.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_371G1_scaffold_636_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26641..27048)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76010.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
helix-turn-helix domain protein
L2_013_371G1_scaffold_636_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27225..29150)
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76009.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_013_371G1_scaffold_636_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29383..30312)
DNA (930bp) protein (310aa)
ABC transporter substrate-binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F16F2D
Uncharacterized protein {ECO:0000313|EMBL:CDD77067.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L2_013_371G1_scaffold_636_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30356..31015)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76007.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type metal ion transport system, permease component
L2_013_371G1_scaffold_636_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31002..32057)
DNA (1056bp) protein (352aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG72_9FIRM
phosphonate-transporting ATPase
L2_013_371G1_scaffold_636_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32286..32594)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97539.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
Displaying 26 items

View Taxonomy