ggKbase home page

L2_013_371G1_scaffold_726

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_726_1
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(767..3862)
DNA (3096bp) protein (1032aa)
DNA internalization-related competence protein ComEC/Rec2 n=2 Tax=root RepID=R6W3B3_9CLOT
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:CDD03950.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
DNA internalization-related competence protein ComEC/Rec2
L2_013_371G1_scaffold_726_2
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3874..4764)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W3G5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03995.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_371G1_scaffold_726_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4829..6298)
DNA (1470bp) protein (490aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
two component system histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WB30_9CLOT
L2_013_371G1_scaffold_726_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6555..7250)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XCL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04012.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
two component transcriptional regulator
L2_013_371G1_scaffold_726_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7306..7953)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6XCL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04017.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
competence protein ComEA helix-hairpin-helix repeat region
L2_013_371G1_scaffold_726_6
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8123..8554)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZ49_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04018.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_371G1_scaffold_726_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8633..10087)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WB43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04019.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
sugar ABC transporter substrate-binding protein
L2_013_371G1_scaffold_726_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10105..11286)
DNA (1182bp) protein (394aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
argD; acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=2 Tax=root RepID=R6WIR6_9CLOT
L2_013_371G1_scaffold_726_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(11300..12172)
DNA (873bp) protein (291aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Acetylglutamate kinase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EWD1_9FIRM
acetylglutamate kinase
L2_013_371G1_scaffold_726_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12248..13471)
DNA (1224bp) protein (408aa)
glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.35 2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZ56_9CLOT
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_013_371G1_scaffold_726_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13583..14044)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WB49_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04029.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_013_371G1_scaffold_726_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14084..15142)
DNA (1059bp) protein (353aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Clostridium sp. CAG:91 RepID=R6WIS1_9CLOT
argC; N-acetyl-gamma-glutamyl-phosphate reductase
L2_013_371G1_scaffold_726_13
unknown

Not on your lists

comp(15396..15554)
DNA (159bp) protein (53aa)

This feature has no annotations

L2_013_371G1_scaffold_726_14
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15647..17479
DNA (1833bp) protein (611aa)
Putative fibronectin-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CH33_9CLOT
Putative fibronectin-binding protein {ECO:0000313|EMBL:ERI68562.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Predicted RNA-binding protein homologous to eukaryotic snRNP
L2_013_371G1_scaffold_726_15
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

17796..19022
DNA (1227bp) protein (409aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FGD0_9FIRM
L2_013_371G1_scaffold_726_16
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

19045..19326
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EVE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01089.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_013_371G1_scaffold_726_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19568..20128
DNA (561bp) protein (187aa)
Response regulator domain-containing protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VM68_9CLOT
Response regulator domain-containing protein {ECO:0000313|EMBL:CDC99703.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
response regulator domain-containing protein
L2_013_371G1_scaffold_726_18
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(20181..21470)
DNA (1290bp) protein (430aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EYH1_9FIRM
L2_013_371G1_scaffold_726_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21498..22184)
DNA (687bp) protein (229aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Clostridium sp. CAG:91 RepID=R6VRR3_9CLOT
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC99700.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_013_371G1_scaffold_726_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22242..24062)
DNA (1821bp) protein (607aa)
Na/Pi-cotransporter n=2 Tax=root RepID=R6VYW9_9CLOT
Na/Pi-cotransporter {ECO:0000313|EMBL:CDC99694.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Na/Pi-cotransporter
L2_013_371G1_scaffold_726_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24590..25195)
DNA (606bp) protein (202aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Clostridium sp. CAG:91 RepID=R6W693_9CLOT
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
phosphate uptake regulator PhoU
L2_013_371G1_scaffold_726_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25286..26044)
DNA (759bp) protein (253aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Phosphate import ATP-binding protein pstB n=2 Tax=root RepID=R6VYV9_9CLOT
phosphate transport system ATP-binding protein
L2_013_371G1_scaffold_726_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26071..26964)
DNA (894bp) protein (298aa)
Phosphate ABC transporter permease PstA n=1 Tax=Clostridium sp. CAG:91 RepID=R6VRP7_9CLOT
Phosphate ABC transporter permease PstA {ECO:0000313|EMBL:CDC99680.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
phosphate ABC transporter, inner membrane subunit PstA
L2_013_371G1_scaffold_726_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26951..27889)
DNA (939bp) protein (313aa)
Phosphate ABC transporter permease PstC n=1 Tax=Clostridium sp. CAG:91 RepID=R6WZT5_9CLOT
Phosphate ABC transporter permease PstC {ECO:0000313|EMBL:CDC99677.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
phosphate ABC transporter permease
L2_013_371G1_scaffold_726_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27919..28854)
DNA (936bp) protein (312aa)
Phosphate-binding protein pstS 1 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXA3_9CLOT
Phosphate-binding protein pstS 1 {ECO:0000313|EMBL:CCY41407.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phosphate binding protein
L2_013_371G1_scaffold_726_26
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(28955..29479)
DNA (525bp) protein (175aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EYI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01846.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_013_371G1_scaffold_726_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29547..30554)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VQZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01078.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Protein of unknown function (DUF3298).
L2_013_371G1_scaffold_726_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30660..31169)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W2Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01079.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ECF subfamily RNA polymerase sigma-24 factor
L2_013_371G1_scaffold_726_29
unknown

Not on your lists

comp(31356..31454)
DNA (99bp) protein (33aa)

This feature has no annotations

L2_013_371G1_scaffold_726_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31487..32236)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJY6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10666.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Displaying items 1-30 of 35 in total

View Taxonomy