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L2_013_371G1_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 536 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_0_1
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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132..650
DNA (519bp) protein (173aa)
Glutamate-rich protein GrpB n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R8F5_9FIRM
Glutamate-rich protein GrpB {ECO:0000313|EMBL:CDC30742.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_013_371G1_scaffold_0_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(718..2049)
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4M0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEU97157.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
putative efflux protein, MATE family
L2_013_371G1_scaffold_0_3
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2247..2978)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q1C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30508.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_013_371G1_scaffold_0_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3149..3694
DNA (546bp) protein (182aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Phosphodiesterase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4L8_9FIRM
phosphoesterase, MJ0936 family
L2_013_371G1_scaffold_0_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3737..4183)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9C9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01442.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_013_371G1_scaffold_0_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4187..4384)
DNA (198bp) protein (66aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8E3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU95648.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted transcriptional regulators
L2_013_371G1_scaffold_0_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4689..4946
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97153.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Copper chaperone
L2_013_371G1_scaffold_0_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4967..7474)
DNA (2508bp) protein (836aa)
DEAD2 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4L4_9FIRM
DEAD2 domain protein {ECO:0000313|EMBL:EEU97151.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Rad3-related DNA helicases
L2_013_371G1_scaffold_0_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7818..8906)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4L3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97150.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_013_371G1_scaffold_0_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8973..9539)
DNA (567bp) protein (189aa)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EFQ06940.1}; EC=3.2.2.- {ECO:0000313|EMBL:EFQ06940.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
uracil-DNA glycosylase, family 4 (EC:2.7.7.7)
Uracil-DNA glycosylase, family 4 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIP1_9FIRM
L2_013_371G1_scaffold_0_11
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9728..10753
DNA (1026bp) protein (342aa)
phosphotransacetylase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q1A2_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:CDC29505.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_013_371G1_scaffold_0_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11273..13138
DNA (1866bp) protein (622aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EEU97233.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEU97233.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4D6_9FIRM
L2_013_371G1_scaffold_0_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13297..13635
DNA (339bp) protein (113aa)
Nucleoid-associated protein FAEPRAA2165_01148 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4D5_9FIRM
conserved hypothetical protein TIGR00103
Nucleoid-associated protein FAEPRAA2165_01148 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_013_371G1_scaffold_0_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13655..14254
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4D4_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
recombination protein RecR
L2_013_371G1_scaffold_0_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14357..14839
DNA (483bp) protein (161aa)
SsrA-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S5_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SsrA-binding protein
L2_013_371G1_scaffold_0_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15524..16705
DNA (1182bp) protein (394aa)
Metallo-beta-lactamase domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMW0_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFQ05521.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Uncharacterized flavoproteins
L2_013_371G1_scaffold_0_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16772..17983)
DNA (1212bp) protein (404aa)
Transporter, major facilitator family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T1_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEU97263.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Major Facilitator Superfamily.
L2_013_371G1_scaffold_0_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18719..19741
DNA (1023bp) protein (341aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Faecalibacterium RepID=C7H3S8_9FIRM
L2_013_371G1_scaffold_0_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19760..22171
DNA (2412bp) protein (804aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S7_9FIRM
L2_013_371G1_scaffold_0_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22240..22800)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H390_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97570.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_013_371G1_scaffold_0_21
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22920..23897)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QH84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30251.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type phosphate transport system, periplasmic component
L2_013_371G1_scaffold_0_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23912..25531)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H388_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97568.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_013_371G1_scaffold_0_23
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25822..26610
DNA (789bp) protein (263aa)
Ricin-type beta-trefoil lectin domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAZ5_9FIRM
Ricin-type beta-trefoil lectin domain protein {ECO:0000313|EMBL:CDC30244.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Ricin-type beta-trefoil lectin domain.
L2_013_371G1_scaffold_0_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26913..28544)
DNA (1632bp) protein (544aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZER5_9FIRM
L2_013_371G1_scaffold_0_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28696..29265)
DNA (570bp) protein (190aa)
Response regulator with putative antiterminator output domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2X5_9FIRM
Response regulator with putative antiterminator output domain
Response regulator with putative antiterminator output domain {ECO:0000313|EMBL:CBK97868.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_013_371G1_scaffold_0_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29315..30634)
DNA (1320bp) protein (440aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H855_9FIRM
L2_013_371G1_scaffold_0_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30778..32865)
DNA (2088bp) protein (696aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EDP20091.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDP20091.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein related to glutamine synthetase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K5Y5_9FIRM
L2_013_371G1_scaffold_0_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33112..34341)
DNA (1230bp) protein (410aa)
SAM-dependent methyltransferase (EC:2.1.1.-)
SAM-dependent methyltransferase {ECO:0000313|EMBL:CBK97871.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK97871.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
SAM-dependent methyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2X8_9FIRM
L2_013_371G1_scaffold_0_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34541..35044
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H848_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95929.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_013_371G1_scaffold_0_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35090..36580)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H847_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95928.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
Displaying items 1-30 of 536 in total

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