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L2_013_371G1_scaffold_1050

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_371G1_scaffold_1050_1
unknown

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2..880
DNA (879bp) protein (293aa)

This feature has no annotations

L2_013_371G1_scaffold_1050_2
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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976..1464
DNA (489bp) protein (163aa)
PTS system sorbose subfamily IIB component n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1WR53_9ACTN
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:ERI05120.1}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
PTS system sorbose subfamily transporter subunit IIB
L2_013_371G1_scaffold_1050_3
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1480..2253
DNA (774bp) protein (258aa)
PTS system sorbose-specific iic component n=7 Tax=Firmicutes RepID=E4LVS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX72317.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L2_013_371G1_scaffold_1050_4
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2246..3106
DNA (861bp) protein (287aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QX97_OLSUV
PTS system mannose/fructose/sorbose family transporter subunit IID
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:ADK68750.1}; TaxID=633147 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 /; VPI D76D-27C) (Lactobacillus uli).;"
L2_013_371G1_scaffold_1050_5
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3140..3544
DNA (405bp) protein (135aa)
PTS system fructose subfamily IIA component n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QX96_OLSUV
PTS system fructose subfamily transporter subunit IIA
PTS system fructose subfamily IIA component {ECO:0000313|EMBL:ADK68749.1}; TaxID=633147 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 /; VPI D76D-27C) (Lactobacillus uli).;"
L2_013_371G1_scaffold_1050_6
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3574..5010
DNA (1437bp) protein (479aa)
glycoside hydrolase, family 32 (EC:3.2.1.-)
Glycosyl hydrolase family 32 n=1 Tax=Enterococcus faecium R497 RepID=J5WF66_ENTFC
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EJX51282.1}; TaxID=1134837 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R497.;"
L2_013_371G1_scaffold_1050_7
unknown

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comp(5157..5444)
DNA (288bp) protein (96aa)

This feature has no annotations

L2_013_371G1_scaffold_1050_8
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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5559..8312
DNA (2754bp) protein (918aa)
PTS system fructose IIA component n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1Y2G7_9ACTN
PRD domain protein {ECO:0000313|EMBL:EUB32171.1}; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli MSTE5.;"
sigma-54 interacting domain-containing protein
L2_013_371G1_scaffold_1050_9
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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8567..9301
DNA (735bp) protein (245aa)
Transcriptional regulator, GntR family n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N7K0_CORGP
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEB06816.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L2_013_371G1_scaffold_1050_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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9499..10962
DNA (1464bp) protein (488aa)
C4-dicarboxylate anaerobic carrier n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9D6_9ACTN
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:CDA35450.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
C4-dicarboxylate anaerobic carrier
L2_013_371G1_scaffold_1050_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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10975..11832
DNA (858bp) protein (286aa)
AP endonuclease, family 2 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7P9_9ACTN
AP endonuclease, family 2 {ECO:0000313|EMBL:EBA40758.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
xylose isomerase domain-containing protein TIM barrel
L2_013_371G1_scaffold_1050_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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11933..12901
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6X6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72471.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sugar isomerase
Displaying 12 items

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